Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03707 ATGGCATCCATTACAGGAACCTCCATGTCCCTTCTCTCTAACCAATCTATGGTAGCTTGTGCTAGGATCTCTGGTCCAAGATCAGTTTCCCTTTCAATTAAGGGAAGAAATTTTCCATCCATTACTTCTCAGCCAAGAGGACGTCGATTTCAAGTTGTATGCGCGGCTAAACCCGAGACTGTGCAGAAGGTGTGTGACATAGTCAAGAAACAATTGGCCCTACCAGAAGGTTCGGATGTTACCGGAGAGTCTAAATTTTCTACACTTGGAGCTGATTCTCTTGACACGGTTGAGATTGTGATGGGACTTGAGGAGGAATTTGGCATTAGTGTGGAAGAAGAAAGTGCTCAGAGCATTACCACCGTTCAAGAAGCTGCCGACATGATCGACAACCTTCTTAAGACCAAGGCTTAA 414 0.4517 MASITGTSMSLLSNQSMVACARISGPRSVSLSIKGRNFPSITSQPRGRRFQVVCAAKPETVQKVCDIVKKQLALPEGSDVTGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQEAADMIDNLLKTKA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03707 137 Hamap Acyl carrier protein [acpP]. 59 133 IPR003231 GO:0006633
Tsu08g03707 137 Gene3D - 56 137 IPR036736 -
Tsu08g03707 137 PANTHER ACYL CARRIER PROTEIN 1 136 - -
Tsu08g03707 137 ProSitePatterns Phosphopantetheine attachment site. 88 103 IPR006162 -
Tsu08g03707 137 PANTHER ACYL CARRIER PROTEIN 1 136 IPR044813 GO:0000036|GO:0006633
Tsu08g03707 137 Pfam Phosphopantetheine attachment site 62 129 IPR009081 -
Tsu08g03707 137 SMART Phosphopantetheine attachment site 61 133 IPR020806 GO:0031177
Tsu08g03707 137 TIGRFAM acyl_carrier: acyl carrier protein 59 131 IPR003231 GO:0006633
Tsu08g03707 137 ProSiteProfiles Carrier protein (CP) domain profile. 58 133 IPR009081 -
Tsu08g03707 137 SUPERFAMILY ACP-like 58 133 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03707 Tsu-Chr8 55219918 55222454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03707 23 137 Acyl Lipid Metabolism Gene Families AT1G54580 56.522 7.78e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03707 - - gmx:100306095 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04189 04 50202948 50226942 Tsu08g03707 08 55219918 55222454 PCT