Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03705 ATGAACCAGTACCATATCTACGAAGCAATTGGTCGTGGAAGATACTCGACTGTTTACAAAGGTAGAAAGAAGAAGACGATCGAGTATTTCGCCATCAAAAGTGTTGATAAATCTCAGAAAACTAAGGTTCTTCAAGAAGTTAGGATTCTTCATACTTTAGATCACCAAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACTTATGGTTGGTTTTGGAGTATTGTGTTGGTGGGGATCTACTTTCCATATTACGGCAGGATAGTCAACTTCCTGAAGATTCTGTTAATGATCTTGCTTGTTACCTCATCAGAGCTTTGCAGTATTTACATTCAAATGGAATAATTTACTGTGACCTGAAACCATCAAATATCCTACTAGATGAAAATGGATGTGCAAAGCTCTGTGATTTCGGATTGGCAAGAAAGTTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGGGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAAGATGGCGGAGTCCATTCTTATGCTTCCGATTTCTGGGCTCTAGGTTGTGTActatatgaatgttatgctgGGAAGCCTCCTTTTGTGGGAAGAGAATTCACTCAGCTTGTGAAATCCATCATTTCAGACCCAACTCCACCTCTCCCTGGAAATCCAAGTCGACCTTTTGTCAATTTAATAAATTCTCTTTTGGTCAAAGATCCGGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGAAAACCAAATTCACTCCAGTGCCTCTTCCTCCTCAACCTGCGTTTGATGACATGATAGAGCTACATGCTAAACCATGCTTATCAGAACATAATGGAGATAAGTCTTCTCAAAACAGAACCCCTCCCAAATATCGTGAAAAAGACATGAAAGGGGTGCTGAAGAAGGATGAAAACTCTGGTTTAGCATCAAGAGGAATTGAGACACCAACAAGAGCAACGCCAAATAGTCACAGAACTCAGACAAAGGGTTCTGGCAGAACACTGCAGAAAGATCCTTCAAATACTAAAAAAggtttgaatcttttgagacTGTCAAGAATagcaaaatcaaatttacaaaaagaaaatgagaaagaaaactATCGACGCCCCTTGCCCAATGGCTCTGAGAAGGATGCAGATGTTAAAATTGAGAATATTGACATGGAACTTGATTTTAATGAGAATAGTGAAGAGGATGCACTTGAAGAAACTGATGGTTCTGAACATACACCTTCTGTGCCCAGTTCAAAAATGGAGAATAATTTGCAGAATCAAGGAAAAGCAGAGGACACTGAAAATGATACACACCAGTTGGACACTCCATCTGTGACTACTCCTGCCTCAGATGATTCGAGGCCATTTGATCACGAGTCAACTCCTGACCGTTCTGACATATCTGCTATTTCTCCAAGTGTGAGCCCTCTAGTGAAAAAACAGAGGCTTAAAGGAGACGTTGGATCTGGCATTGACTCTGATTCTTCTAGATCATCTAACGACTTCTACCAGGTTATTTGGCACCCATCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGACAAAGGCTCAGAAGTCATTCCTTCACTTCCTTTTGAGGCGTTGCAAGCACCTGATTTTGTCAAGATGCCTAAAGAGCAATTGGAAGCAGTCCAAAACCGAATTATAGGTATCTTGAACGGGAGTACTAGCATTGGAGACAAACAGAATGTGGTTAGGTACCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATTATGCTCATTCTCGTAAAGTTGCTACGTCAATCCAAGGCGTCAGCTTTACGTGTTCAGCTTGCTTCACTGATTGGTCTGTTGATTAGACATTCTACTTTTGTTGATGACAGTTTGGCTAATTCTGGAATACTAGGTTCATTGACGGATGGCCTTAGGGACAGGCACGAAAAAGTGAGGAGGTTTTCTATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACCCAAAGTGCGGACTCTAAGGATAACACTCCACTTGAATCTCCATCAAAGGACAATAGGACTGCACATGGTTGGCAGGTTCCAAATTCATTAATTTCCTTGGTGTCATCGATATTGAAGAAAGGTGAAGATGATATAACTCAATTGTATGCACTGAGAACCATTGAGAATATTTGCAGTCAAGGAGGGGTCTGGGTGGGACGTTTTACCAGTCAAGATGTTATTAATAATCTCTGTTATATCTATAGAGCGACTGTGAAACAGGAAAGCATGAGGCTTACTGCAGGATCATGTTTGGTGCGCTTAGTTCGTTTTAATCCTTCTTGCATTCAGTCTGTTGTAGAGAAACTCTCTTTCAAGGACCTAGCTTCTGCTCTTATCAAAGGTAGTCCACGAGAGCAGCAAATCAGTTTAAATCTTCTTAACATGGCAATGCTTGGAAGTCATATGTTCACAAATGTTGGAAGATACCTTATACAACTTGCAGAGGATAAGAATCTGATACCCAGTCTTTTGGCTCTTGTTGAGCAGGGTAGTGAAGTTTTAAAAGGAAAAGCACTTGTCTTTGTGGCTCTCCTCTGCAAGCACGGTAGGAGGTGGCTTCCCCAGTTCTTTTGTAGCCATAAGTTACTTTCGGTGGTAGATAGGCTGGGAAAAGAGAAGGATGCCTTTGTGCGGCAGTGTTTAGATGCATTTCTGCATATTGTGGCATCTACTATTCCAGGTTTACTGGATATAATAACCGGAGATATCCAGCAAATGATGGGAGGAAGGCGCCATGGACATATCTCTTCCCTTACCAGCAGGTCTGCTCCTAAATCCAACATTCATTTGTTTCCTGTGGTCCTTCATCTTCTTGAAAGTTCAGCTTTTAAGCACAAAGTGGCGACACTTCCAGTACTACGGCAGTTGGCAAATCTGATTAAACTCGTGGAGGCACCATTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTAGAGTCTCTCACAGAGGAATCTTCTGTGATCCTTGCCAATCCCGACATTTTCATTCGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGATGCCAGATTTTTGTgccttaaaatcttttttgATGTGATGATTATTCTCTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGAACGATCTGAAATTCGTATCAAATACACATTTTCTTCCTCTCTACCCGACCTTGATCGAAGATGAAGATCCTATTCCTATCTTTGCACAGAAGCTTCTTGTCATGCTACTAGAGTTCAGTTTTATTTCAATTCCAGACATTCTACATCTGAAGACAATTTCACAATGCTTTGAATTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTTTGGCTTCTGCTCTTGAAATGGAGTCCAAGTTACTCTCACAATTGAAAGTTGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTGCTGGAGCCAACTCTTGGGCTGTGTAGGGCCTTTCTAGCACGTTCAGTCAGCTGTGCAAAAGGCTTCAGCCACACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCTGAGGTAAGCGGCGCTGTTGATCCCCAGCAATGCATAAGAGATATAACAGACTTTGGAAGCAACGTTGGAGTCTTCCTAGAGTTGAGTGCATCTAGAGAGACCAGTGTTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTGCTCAAGGCTGCTCCTAGAGAAGCTACCACTGGTCTACTAACAAATCTCCCCAAGGTCACTACGATCCTAGAATCCTGGAGTAAAGGAACCCCTCACTTGACAGTCCAGAGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTGTTGCATGCAATGATATTATCAATATCAATACCAGAGATTACAAGAATTGAAGTGATAGTTTCAGAACTCAAGAATTCAACTGTGCCCGCTTTAGCCAAAACTGCTGGTTTGGCAGCCTTGGAGTTGCAGCGGTTACCTCGCtgcatttga 4101 0.4104 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVNDLACYLIRALQYLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGKPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKFTPVPLPPQPAFDDMIELHAKPCLSEHNGDKSSQNRTPPKYREKDMKGVLKKDENSGLASRGIETPTRATPNSHRTQTKGSGRTLQKDPSNTKKGLNLLRLSRIAKSNLQKENEKENYRRPLPNGSEKDADVKIENIDMELDFNENSEEDALEETDGSEHTPSVPSSKMENNLQNQGKAEDTENDTHQLDTPSVTTPASDDSRPFDHESTPDRSDISAISPSVSPLVKKQRLKGDVGSGIDSDSSRSSNDFYQVIWHPSDLSVRPVMPSRKVDKGSEVIPSLPFEALQAPDFVKMPKEQLEAVQNRIIGILNGSTSIGDKQNVVRYLEMLSSNADAANILTNGPIMLILVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDRHEKVRRFSMAALGELLFYISTQSADSKDNTPLESPSKDNRTAHGWQVPNSLISLVSSILKKGEDDITQLYALRTIENICSQGGVWVGRFTSQDVINNLCYIYRATVKQESMRLTAGSCLVRLVRFNPSCIQSVVEKLSFKDLASALIKGSPREQQISLNLLNMAMLGSHMFTNVGRYLIQLAEDKNLIPSLLALVEQGSEVLKGKALVFVALLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLDAFLHIVASTIPGLLDIITGDIQQMMGGRRHGHISSLTSRSAPKSNIHLFPVVLHLLESSAFKHKVATLPVLRQLANLIKLVEAPFQGRDDFQITLLRILESLTEESSVILANPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLNDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASALEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTLGLCRAFLARSVSCAKGFSHTTEPTLLGDCPPEVSGAVDPQQCIRDITDFGSNVGVFLELSASRETSVADIASQCVVLLLKAAPREATTGLLTNLPKVTTILESWSKGTPHLTVQRMLHALGYACKQYLLHAMILSISIPEITRIEVIVSELKNSTVPALAKTAGLAALELQRLPRCI 1366
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 283 394 - -
Tsu08g03705 1366 CDD STKc_ULK4 3 257 - -
Tsu08g03705 1366 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tsu08g03705 1366 SUPERFAMILY ARM repeat 566 916 IPR016024 -
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 320 357 - -
Tsu08g03705 1366 Gene3D Transferase(Phosphotransferase) domain 1 1 315 - -
Tsu08g03705 1366 Gene3D - 553 915 IPR011989 -
Tsu08g03705 1366 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 407 507 - -
Tsu08g03705 1366 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 419 439 - -
Tsu08g03705 1366 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Tsu08g03705 1366 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1363 IPR044591 GO:0000911|GO:0000914|GO:0008017
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 296 318 - -
Tsu08g03705 1366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Tsu08g03705 1366 MobiDBLite consensus disorder prediction 367 394 - -
Tsu08g03705 1366 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu08g03705 Tsu-Chr8 55209047 55215780 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03705 2 259 MAP Kinase Kinase Kinase AT3G13530 32.453 2.29e-36 148
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Tsu08g03705 Pkinase 1e-65 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03705 K17545 - gmx:100777288 2342.77
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03705 08 55209047 55215780 Tsu08g03705 08 55209047 55215780 ECH