Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03586 ATGATCTCTTCAATCAAATGCACAACTTCATCAACCTCTACTTTCTCAAGCACAAAACTTCCTCTTCCAAGGTCTCAACTTTCAATTCTACCAACTATTCAAAATGTTGAACAAAACATGAATTTCCCTCTACTATCTTCCAAGAAACCTCTCTACCTTTCATCCATTGAGAGTTTTACATTATTGACAAAACCCAAAAGAAAGAATGTGACTAAGTGTCAAGCCTATGAGGGTGATAGATCAAGACCACTAGAGATTAACATTGAGCTTCCTAGTAAAGAATCAGctcaaaaactcaaaattggATTGTATTTTGCTACTTGGTGGGCTTTGAATGTTGTGTTTAACATTTATAACAAGAAAGTTTTGAATGCTTTCCCCTACCCTTGGCTTACTTCAACTTTGTCCTTAGCTGCTGGTTCTCTCATGATGTTAATCTCATGGGCTACTAGAGTTGCTGATGCCCCAAAAGTTGATTTGGATTTCTGGAAAGCACTTTTTCCTGTAGCTGTAGCACACACAATTGGGCATGTTGCTGCAACAGTGAGCATGTCTAAAGTAGCAGTTTCATTCACTCACATAATCAAGAGTGGAGAACCAGCTTTCAGTGTTCTAGTATCAACATTCTTACTTGGAGAAGCATTTCCCATGTCAGTTTACCTCTCATTGTTGCCAATAATTGGTGGTTGTGCACTAGCTGCTATAACTGAGCTCAACTTCAACATGATTGGTTTTATGGGAGCTATGATATCAAATTTAGCATTTGTATTCAGAAATATATTCTCAAAGAAAGGAATGAATGGAATGAGTGTTAGTGGAATGAACTATTATGCTTGTCTTTCAATGATGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCTAAAGTTTGGGCTGCTGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTGGTTGCACAAAGTGTGTTCTACCATTTGTATAATCAAGTCTCATACATGTCACTTGATCAAATTTCTCCCTTAACATTCAGCATAGGAAACACAATGAAAAGAATTTCTGTAATAGTTTCTTCCATTATTATCTTTCACACACCACTTCAACCTATCAATGCTCTTGGAGCAGCAATTGCAATTCTTGGTACCTTCATCTATTCACAGGCTAAACAGAACTAA 1182 0.3731 MISSIKCTTSSTSTFSSTKLPLPRSQLSILPTIQNVEQNMNFPLLSSKKPLYLSSIESFTLLTKPKRKNVTKCQAYEGDRSRPLEINIELPSKESAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVADAPKVDLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSTFLLGEAFPMSVYLSLLPIIGGCALAAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMNGMSVSGMNYYACLSMMSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPLQPINALGAAIAILGTFIYSQAKQN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03586 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 389 - -
Tsu08g03586 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 235 - -
Tsu08g03586 393 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 29 391 - -
Tsu08g03586 393 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 392 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tsu08g03586 393 Pfam Triose-phosphate Transporter family 99 388 IPR004853 -
Tsu08g03586 393 PANTHER SOLUTE CARRIER FAMILY 35 29 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03586 Tsu-Chr8 53866585 53869272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03586 8 393 Antiporters AT1G61800 78.238 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03586 K15283 - gmx:100804205 629.017