Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g03556 | ATGTCTTGCTCCAATATAACCATGTTGGTCTCTTCCAAACCTTCATTACCTGATGCATCTAACCTCTCTTTTCGTTCAGCTTTCAACCCTTTTCAGCTTCCTTCACAAAACTCATCATGTTCTTCAACTCCTTATAGACCTGCATCAATTCAATGTGGTCTAAGAGAACTCAGAACCCGTATTGATTCTGTCAAAAACACTCAGAAAATCACTGAAGCAATGAAACTTGTTGCTGCTGCAAAAGTCAGAAGAGCTCAAGAAGCTGTTGTTAATGGCAGACCATTTTCACAGACACTTGTTGAAGTTCTTTACAGTATCAATGAACAACTTCAAACTGAAGATGTCGATGCGCCGCTTACTAAGCTTAGACCAGTTAAGAAAGTTGCTCTTGTTGTTTGTACAGGTGATAGAGGTCTTTGTGGTGGATTCAATAATGCAATATTGAAAAAAGCTGAAGCTAGAATTGCTGAGTTGAAAAACCTTGGTGTTGATTACACTATTATAAGTGTTGGTAAAAAGGGTAACACTTATTTCTTACGTAGGCCTTATATACCTGTTGATAGGTATCTTGAAGGTGGAAATCTTCCTACTGCTAAAGATGCACAAACAATTGCTGATGATGTTTTCTCACTTTTTGTTAGTGAAGAAGTTGATAAAGTTGAACTTTTGTATACTAAATTTGTTTCATTAGTGAAATCAGATCCTATAATTCATACTTTACTACCACTTTCGCCGAAAGGCGAAATATGTGATATTAATGGAAACTGTGTTGATGCTGCTGAAGATGAGCTTTTCAGGTTAACAACAAAAGAAGGAAAGTTAACTGTTGAAAGAGATGCTATTAGATCAAAGACGATTGATTTTTCGCCTATTTTGCAGTTTGAGCAAGATCCTGTTCAGATTCTTGATGCACTTTTGCCACTTTATTTGAACAGTCAAATATTGAGAGCATTGCAGGAATCACTTGCTAGTGAATTAGCTGCTAGAATGAGTGCTATGAGTAGTGCTTGTGATAATGCTGTTGAGTTGAAGAAGAATTTGTCAAGGGTTTATAATAGGGAACGTCAAGCTAAGATTACCGGTGAAATTCTCGAAATTGTTGCTGGTGCTGATGCATTAGTGTAG | 1125 | 0.3689 | MSCSNITMLVSSKPSLPDASNLSFRSAFNPFQLPSQNSSCSSTPYRPASIQCGLRELRTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSQTLVEVLYSINEQLQTEDVDAPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKNLGVDYTIISVGKKGNTYFLRRPYIPVDRYLEGGNLPTAKDAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDAIRSKTIDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSACDNAVELKKNLSRVYNRERQAKITGEILEIVAGADALV | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g03556 | 374 | Gene3D | - | 121 | 244 | - | - | |
Tsu08g03556 | 374 | CDD | F1-ATPase_gamma | 54 | 370 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | Hamap | ATP synthase gamma chain [atpG]. | 51 | 373 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 1 | 374 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | ProSitePatterns | ATP synthase gamma subunit signature. | 359 | 372 | IPR023632 | - | |
Tsu08g03556 | 374 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 53 | 373 | IPR035968 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 53 | 120 | - | - | |
Tsu08g03556 | 374 | PRINTS | ATP synthase gamma subunit signature | 320 | 339 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | PRINTS | ATP synthase gamma subunit signature | 351 | 372 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | PRINTS | ATP synthase gamma subunit signature | 218 | 235 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | PRINTS | ATP synthase gamma subunit signature | 125 | 144 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | Pfam | ATP synthase | 54 | 373 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Tsu08g03556 | 374 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 275 | 373 | - | - | |
Tsu08g03556 | 374 | PANTHER | ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC | 1 | 374 | - | - | |
Tsu08g03556 | 374 | TIGRFAM | ATPsyn_F1gamma: ATP synthase F1, gamma subunit | 53 | 373 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g03556 | Tsu-Chr8 | 53575910 | 53577034 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g03556 | 28 | 373 | Primary Pumps ATPases | AT1G15700 | 70.317 | 3.61e-179 | 501 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g03556 | K02115 | - | gmx:100797290 | 625.935 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu08g03556 | 08 | 53575910 | 53577034 | Tsu08g03556 | 08 | 53575910 | 53577034 | ECH |