Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03546 ATGAAGAGTAAAATTGAAAGTAGCACTCTCAAAGAATCCTCAACTCAAACTAtgtcttcatcatcttcttctcttaTTAGCGGAGTTGTTGATAATAACCCTTCATACCCATCCGAGGTACAAATTCTTCACCACCGTTTTAATTCTGGTCATTTAGATACGAGTTTTAGGCCACCTACAGTGAGGCCTTATGTTCGATCAAAAATGCCTCGGCTTCGTTGGACGCCAGATCTTCACCGTTGCTTTGCGCATGCAGTTGAAAGGCTTGGAGGAGAAGAAAGGGCTACACCAAAGTTAATTTTACAACTAATGAATGTAAGGGGGATTACTATATCTCATGTCAAAAGCCACCTCcagATGTATAGGGGCATGAAACAGGAGCTAATGATTCAAGAATCAAAGAAGAATAATATGGCAGCAGGTTTATTAGCTTCAACAAACTCCTCCTCAGCCCTTGTTCCAAGCTGCCAACAGAGTCCTGCTGGCCAAAAACAGAATGCTTATGAGTCAGTGTCTTACTACAACGGAAATCAAGTCAATGAATCGGTTATTATTTGTAACGGTGAAGAGCAGAAGATGCACACATACATCATCTTTGAGGGTATTCTCGGAAGCCGGATTGTCCAAgCCAACAAAAGGAACCAAGCAAGAGGGGATCAAAGAGTGAATGGAGAAGACACATTGTCCCTCGCAATAAGTTCAAAAGGTTCAAACACAAATGATGTCTCTCTTGAGCTCAAGCTAAACTGA 750 0.4013 MKSKIESSTLKESSTQTMSSSSSSLISGVVDNNPSYPSEVQILHHRFNSGHLDTSFRPPTVRPYVRSKMPRLRWTPDLHRCFAHAVERLGGEERATPKLILQLMNVRGITISHVKSHLQMYRGMKQELMIQESKKNNMAAGLLASTNSSSALVPSCQQSPAGQKQNAYESVSYYNGNQVNESVIICNGEEQKMHTYIIFEGILGSRIVQANKRNQARGDQRVNGEDTLSLAISSKGSNTNDVSLELKLN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03546 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 12 187 IPR044848 GO:0003700
Tsu08g03546 249 MobiDBLite consensus disorder prediction 1 30 - -
Tsu08g03546 249 Gene3D - 69 126 - -
Tsu08g03546 249 MobiDBLite consensus disorder prediction 8 30 - -
Tsu08g03546 249 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 12 187 - -
Tsu08g03546 249 Pfam Myb-like DNA-binding domain 72 122 IPR001005 -
Tsu08g03546 249 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Tsu08g03546 249 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 70 122 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03546 Tsu-Chr8 53453488 53457324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03546 61 129 G2-like Transcription Factor Family AT1G14600 69.565 1.97e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu08g03546 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03546 - - cam:101502381 233.802