Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03532 ATGGATTGGATTAGAGGAAGAATCATTGGCCGGGGCTCGACCGCAAATGTCTATATGGCCGAGCACCGTGGTGATTTTGGTGAAGTTTGTGCGGTGAAGTCTGCTGAGCTTCACCGCGCGGAGTTTTTGAAGAAAGAAGATGAGATTCTCTCTAAGGTGAAATGTTCACAAATTGTGAACTATCAAGGTTGTGAAGTGACGGTTGAGGATGGTGTTcaattgtttaatttgtttatggAGTATGCAACTAAAGGGACTGTTTCCGATGCGGTTCGCGGTGGAAATGGAATGGATGAAGCTATGGTGGGGTTATATGTGCGACAAATTTTATTAGGACTTAACTATCTTCATTCAAATGGGATAGTGCATTGTGATTTGAAGGGACAGAATGTGTTATTGACGGAACAAGGAGCGAAAATTGCGGATTTTGGTTGTGCTCGGAGGGTTGATGAGGAGTTGGTGATCTCCGGTACGCCGGTTTTTATGGCACCGGAGGTGGCGCGCGGCGAGGAGCAGGGGTTTGCAGCTGATGTATGGGCTTTGGGGTGTACTATGTTGGAGATGATCACCGGGAAAATGCCGTGGGGTGGAGTTTCTGATCCGGCGGCTGTTTTATATCGAATTGGATTCTCCCGTGATATGCCGGAGATTCCGGACTCTGTTTCGGAACAGGGGAAGGATTTTTTAAGGAAATGTTTGAAGAGAGATCCAAATGAGAGATTGTCAGTGATTGAGCTTCTAGAACATGATTTTGTTGCTGAGAAGTTTAAGGATTCAATGTTTGATTCGGAAACTCCGACGACTGTGTTGGAAGGTGGGTTCTGGGATTGGGATTCTTTGGATACAACTCAGGAGGTGGGTCCCACAACTGATCGTTGTTCCTCGGATTCTTCGAGTTCGAGTCCAAGAGACAGAATTCAAAGATTATGTTCAAATGAGGCTTTTTGGgaatttgatgatgaagaagattgGGTTACAGTGAGAAACAATGGTGAAGATTTGAATGCATTGTCATTTGAAGAAATGGAAGATAATGAATCAGACAATGAATTAGACATTGTTTGTGAACATGGTGATGATAAGATtagtttgTTGATAGTGGCACCAAACCAACCCTGCAATGGGGCTGCACGTTATCATGCTGTCTGTCCTAATTTATTCTGGCTGATTTTCCATTAG 1179 0.4275 MDWIRGRIIGRGSTANVYMAEHRGDFGEVCAVKSAELHRAEFLKKEDEILSKVKCSQIVNYQGCEVTVEDGVQLFNLFMEYATKGTVSDAVRGGNGMDEAMVGLYVRQILLGLNYLHSNGIVHCDLKGQNVLLTEQGAKIADFGCARRVDEELVISGTPVFMAPEVARGEEQGFAADVWALGCTMLEMITGKMPWGGVSDPAAVLYRIGFSRDMPEIPDSVSEQGKDFLRKCLKRDPNERLSVIELLEHDFVAEKFKDSMFDSETPTTVLEGGFWDWDSLDTTQEVGPTTDRCSSDSSSSSPRDRIQRLCSNEAFWEFDDEEDWVTVRNNGEDLNALSFEEMEDNESDNELDIVCEHGDDKISLLIVAPNQPCNGAARYHAVCPNLFWLIFH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03532 392 MobiDBLite consensus disorder prediction 285 304 - -
Tsu08g03532 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tsu08g03532 392 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 343 - -
Tsu08g03532 392 Gene3D Transferase(Phosphotransferase) domain 1 2 286 - -
Tsu08g03532 392 ProSiteProfiles Protein kinase domain profile. 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03532 392 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
Tsu08g03532 392 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
Tsu08g03532 392 PANTHER MAP KINASE KINASE KINASE 1 343 - -
Tsu08g03532 392 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03532 392 CDD STKc_MAPKKK 2 252 - -
Tsu08g03532 392 Pfam Protein kinase domain 6 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03532 Tsu-Chr8 53358532 53360180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03532 1 275 MAP Kinase Kinase Kinase AT2G32510 51.557 1.98e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu08g03532 Pkinase 5.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03532 K20716 - gmx:100802174 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03532 08 53358532 53360180 Tsu08g03532 08 53358532 53360180 ECH