Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03513 ATGGTTTTAGCTATTAAAACATTACGATTTTCCAGGAGCTACTACAAATGCAGCAGTTTCAAAAATTGTCCAGCTAAAAAACGAATTGAAAAAAGCAAAACCGAAGAGAACACTTATGTTGTAACATATCGAGGAAAGCACAATCACCAAAAACCAGAAGTTAATGTGACCTCTCAAAACAAGTCATCAGAGGCTAGATTACCCGTTATCGGAGAAGCTGGATCATCCCAAAACGTCGAAAACTTGGATTCTTCTAATGTGGAGATGGTGTGGTTTGATCAATCAGAGAGTAACAACGCTCAAATTCTCGACGGTCGTTCAAAAATCACTAATCCAAAAATTGAACTTAATGAAAGTCAATCACATGTTGTCGGAGAAGCTGGATCGTCCgaaaatattcaaaaattaGATTCACATAACATGATGATGTTACAACGTGATGAACCCAAGAGAAGCAATGCTCAGATTTTTCTTGGTGAATTAGAAATCCCTTATTCTGAAACAAATTTTATTGGAAACTATTATGACgatgatgatattttgataCCAAATATATCAGCTATGTCAAAAGATTTTCTATTGGACTTCAATCACCTCAATGGTGGTACTGTATTACCTTAG 621 0.3446 MVLAIKTLRFSRSYYKCSSFKNCPAKKRIEKSKTEENTYVVTYRGKHNHQKPEVNVTSQNKSSEARLPVIGEAGSSQNVENLDSSNVEMVWFDQSESNNAQILDGRSKITNPKIELNESQSHVVGEAGSSENIQKLDSHNMMMLQRDEPKRSNAQIFLGELEIPYSETNFIGNYYDDDDILIPNISAMSKDFLLDFNHLNGGTVLP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03513 206 Gene3D WRKY domain 4 53 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g03513 206 Pfam WRKY DNA -binding domain 5 50 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03513 206 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 12 201 - -
Tsu08g03513 206 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 201 IPR044810 GO:0003700
Tsu08g03513 206 ProSiteProfiles WRKY domain profile. 5 52 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03513 206 SMART WRKY_cls 4 51 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03513 206 SUPERFAMILY WRKY DNA-binding domain 5 52 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03513 4 52 WRKY Transcription Factor Family AT1G30650 48.980 2.64e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu08g03513 WRKY 1.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03513 - K13425 mtr:MTR_2g024380 211.075