Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03487 ATGAGTCAACTCGGTTTTTTATTACAGGAACCAGTCACCACCACCACGACTCAGACTGAGTCAAGAACGATTCTCGGTTTATTAAGAGAAGAACAAATGGACAGTCTTGATGATTTGCCTCGTAGAAGAAGACGTAGCTTTAAAGAACGGTTAGGATTCATCGGTTTCGGTTGTTGTGGTACCACCTGGGGATTccgttcttcttcttcttcagctcaATTATCTCAGAATATTCAGCAACAAAGTCCGGATATGGATATTGATACGGGTCCGGGTCAGGATCCGAATATGTGTTTGGGTTTAAGTTTAACAGCTCCGACAAGCTCGGGTTCGGGTTCAAGTAGTATGAATCTTGCGGCGGCGCTGGCGGCGGAGAGACAACTCCGAGGAGCAGGGCAAACGGGGGAAACCGTCGTTGGAGTGGGGAGGATGCCGGGGACGCCGTGGAGAGTGTCGTTGATGCGGTTGTTGGAGGAAACGGAAAATGGGGACACGGTGGCGGTTGTTTCTAAGGTGGCGGAGGATAAAGTTTGTAGTGTAGCGGatgaaagtccagatgctgaagcttttgaattccagcctgaagaaactgcagTTGTGGAAGAGCTTGAGGTAACACCTGATAGTCCTATCACTGATAATACTATTGCTCcagatcctgaggctgctcctagtactgatgacatggaagtggatattgatcctgtagcaaaggttactgaaactggtgaccccatggttgacaatggtctgaatctcatcaaggaccctgttcctcaatctgacgttgtgccagatgctgaagcatctttggaccaacaggttcctcgTCCTAATACTGTAGCTGACGTATGTTCTGatactggttttagtagtgatgatactgataagtctccgcccctggtgaagacatttggtgctggtgttgctaagagactgaggagcagttctggtaaagctatagcATCTGCCCCACAGCCCCCTGTTGTAGAATCAGTGAAGAGACTTGCCAAGAAACCCATGTATGGTCCCTCTCGACCTAAGAGTCGTtttgatactcctgttgtccagaagaaacagttgaagagaaaggCTGTAGAGAGTAACTCTGTCTTTGAGGAAGAAGTGTCTAAAGAtgaagcatctggtgaagcttatgttggcagacaaagtgtaggtgacaagaagagagCTCTGATGAAAGCTCCTCTGAATGATGTCCTTGCTCCTGTGTTTTACTGCTCCTATTGTTCTTGTCTGTCTGAACCTTGA 1272 0.3066 MSQLGFLLQEPVTTTTTQTESRTILGLLREEQMDSLDDLPRRRRRSFKERLGFIGFGCCGTTWGFRSSSSSAQLSQNIQQQSPDMDIDTGPGQDPNMCLGLSLTAPTSSGSGSSSMNLAAALAAERQLRGAGQTGETVVGVGRMPGTPWRVSLMRLLEETENGDTVAVVSKVAEDKVCSVADESPDAEAFEFQPEETAVVEELEVTPDSPITDNTIAPDPEAAPSTDDMEVDIDPVAKVTETGDPMVDNGLNLIKDPVPQSDVVPDAEASLDQQVPRPNTVADVCSDTGFSSDDTDKSPPLVKTFGAGVAKRLRSSSGKAIASAPQPPVVESVKRLAKKPMYGPSRPKSRFDTPVVQKKQLKRKAVESNSVFEEEVSKDEASGEAYVGRQSVGDKKRALMKAPLNDVLAPVFYCSYCSCLSEP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03487 423 MobiDBLite consensus disorder prediction 279 298 - -
Tsu08g03487 423 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 180 - -
Tsu08g03487 423 PANTHER OS01G0917900 PROTEIN 21 180 - -
Tsu08g03487 423 MobiDBLite consensus disorder prediction 339 358 - -
Tsu08g03487 423 MobiDBLite consensus disorder prediction 279 299 - -
Tsu08g03487 423 MobiDBLite consensus disorder prediction 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03487 Tsu-Chr8 52848407 52854392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03487 24 190 C3H Transcription Factor Family AT4G22250 36.022 3.86e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03487 - - aip:107638663 110.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04836 04 55411465 55412393 Tsu08g03487 08 52848407 52854392 PCT