Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03428 ATGCATAGTGATCATAATATACTTGAGCCTCCACCAACAAGTTTTATTCACTTATTTGATCAAGATTCTGAGAATAATGTTAATGGAATGGCGGTTAATGCATGGAAGTCTCTGTCTAATGAAgataaaatacattatttgGAAAAGGAAGCTAAGCGGAAAGCTAAATATGAGAAACTTCAAAAAGAACCTGTTTTTTCTGTCATATTTTCATCTGTTCTTGGTGATAGATATCCAATTCAGCTATTTTTTGTCGAAGGGTCTCAATGGGTTCCGGGGTATTATAAGGCATTTGAAGCTATCGGAAAGCCTTCGACTTTTTATATTTGGGTTTTGGTTTCGGGCGTGTTTTATCATCTTTATAATCAATCGTCTTACCAAGCATTGGATGAAATTAGGCGTTAA 405 0.3407 MHSDHNILEPPPTSFIHLFDQDSENNVNGMAVNAWKSLSNEDKIHYLEKEAKRKAKYEKLQKEPVFSVIFSSVLGDRYPIQLFFVEGSQWVPGYYKAFEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEIRR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03428 134 Gene3D High mobility group box domain 11 67 IPR036910 -
Tsu08g03428 134 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 83 132 - -
Tsu08g03428 134 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 62 82 - -
Tsu08g03428 134 PANTHER SOLUTE CARRIER FAMILY 35 83 132 - -
Tsu08g03428 134 PANTHER SOLUTE CARRIER FAMILY 35 62 82 - -
Tsu08g03428 134 SUPERFAMILY HMG-box 5 62 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03428 Tsu-Chr8 52186299 52187281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03428 78 132 Antiporters AT5G17630 74.545 1.11e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03428 K15283 - gmx:100101869 100.523