Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03417 ATGTATTCCCGGAACCAGAATCGGCCACCGCGAAGTCCCTCCAATATGCAAAGAAAAATCGGTGAAGAAATTCCTTCAGATAAGCGTAGAAGGATTGGTAGTGAAAGAATGGTTGGACAAGGTAGAGTTAGGGTTCCATTTAGtgcaataaacaacaaatcaGAAGCTAATAATGGTGGTGCCGGTGCTGTCGAGGGATCTGAACCTAGCATTGTTGATTTCACTAAAGAGGAAGTAGAAGCTTTGTTGAATGAGAGGATGAAGAAGGAGACTCGCTTAGATACTAAGAAAAAAATGGAGCAGATGGGGGATCTTATTAAGAGACTTAAAAACTGTGTTAGATGGTTTAAGAGAGTTGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGACAGATCTAGATTCTGCCGAGAAGAAATGCATTGATATTGAGAATGAGATGAAAATTAAGATAGCAGAATTGAACGAGGCTATATCAAATTTGAGAATGACGATTTCCTCTTTAGAAGAGAAGATTGCAAAGGAAGAATCAGATAAATTGGAAGCTGTTGAACgttatagaaaagaaaaagaagccaGAAATGAAGCTGAGCAGATGAACGTTTCACTTACAACTGAACTTGAGAAAGTTTCCAATGCGAAATCAGCTGCTGAGCAGAAGGCCATTGATAACGAGAACCGGTGCGAGAGATTGCAAGAGTATAATGACAGTTTGCATCAGTGCAATAGTCGCCTTCAGTCAAATCTTGAAACAGCTAATAAAGCACATACACAACTGGAAAAAGAGAAATCAAGTGCTGTTGAAAACCTTAGCTATGTAAGAGGAACCAACAAGGCATTGCAAGAGCAGTTGGCATCCCTTAAAGCTTCACAAGATGAGGCTACAAAGGCGAAAGACATGTTAGCTATTGAACTCAAATGCCTCCGAGATGAGCTAAAACAAATTAGAGACGACCGTGATCGCCAACTAGGACAAGTACAATCTTTAACTGGAGAAGTAGCTAAATATAAAGAATATACTGGGAAATCAAGTGAACAATTGGGTACATTGACGGCTaaaacaagtgctcttgaggaGGTATGTACTTCACAAAGACAACAAATAGATATGTTGCAGCAACAGTTGAATGCTGAAAAGGAGAAGTTAAAGatgACTGATTTATTGCATTCAGAAACAAGAACGGTGTTTGAAGACCAGAAAAGAATAATATGTCAATTACGAGAGAGACTGgaagaaaaagaacaacaaCTAAATGAAGGAGAATCATTACGGAAGAAACTGCACAACACCATTCTAgAATTAAAAGGAAATATCCGTGTATTCTGCCGTGTCCGACCTTTGCTACCTGATGATGGTCCTGCCGCAGATATGGTTGTTTCGTTCCCTTCATCAACAGAAGCTCTTGGCCGGGGTGTTGAATTAGCACAGAGTGGGCAGAAGTATTCTTTTACATTTGACAAAGTATTTGATCACAAGGCTTCACAGGAGCATGTTTTCACAGAGATTTCTCAGCTGGTACAAAGTGCCCTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACGATGATTGGCAGGCCTGGTCCACCTGAGCTGAAAGGAATGATCCCTCGTTCACTTGAACAGATATTCCTGGTTAGTCAGGCCTTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCCTCAGTACTTGAAATATACAACGAGACCATAAGGGATCTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTGTACATGATGCTAATGGAAAAAACACACATGTTCCAGAGCTAACTATTATAGATGTTTCCGGCGCAGATGAGATTTCCACCCTCTTACAAAAGGCTGCACAAAGCAGGTCAGTAGGCAGAACACAGATGAATGAACAATCGTCGCGAAGtcactttgtctttactctgcGAATAAGCGGCATAAATGAGAACACCGAGCAACAGGTTCAAGGTGTTCTAAACCTGATTGATCTCGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACCGGGGACCGTCTGAATGAAACTAAGGCAATAAACAAAAGCCTTTCTTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTTAGGAATTCTAAATTGACGACCCTTCTGCAGCCATGCCTTGGCGGAGACTCAAAGACACTGATGTTTGTAAATATTTCTCCTGACCCATCTTCAACAGGAGAGTCACTCTGCTCTCTACGTTTTGCCGCAAGAGTAAATAGCTGCGAGATTGGTATTCCACGGCGACAGACATCTGCAAAGTTCTCTGATTCTCGTTTGAGCTACGGCTAA 2367 0.3971 MYSRNQNRPPRSPSNMQRKIGEEIPSDKRRRIGSERMVGQGRVRVPFSAINNKSEANNGGAGAVEGSEPSIVDFTKEEVEALLNERMKKETRLDTKKKMEQMGDLIKRLKNCVRWFKRVEEGYVQEKEKLQTDLDSAEKKCIDIENEMKIKIAELNEAISNLRMTISSLEEKIAKEESDKLEAVERYRKEKEARNEAEQMNVSLTTELEKVSNAKSAAEQKAIDNENRCERLQEYNDSLHQCNSRLQSNLETANKAHTQLEKEKSSAVENLSYVRGTNKALQEQLASLKASQDEATKAKDMLAIELKCLRDELKQIRDDRDRQLGQVQSLTGEVAKYKEYTGKSSEQLGTLTAKTSALEEVCTSQRQQIDMLQQQLNAEKEKLKMTDLLHSETRTVFEDQKRIICQLRERLEEKEQQLNEGESLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTEALGRGVELAQSGQKYSFTFDKVFDHKASQEHVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGMIPRSLEQIFLVSQALKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIVHDANGKNTHVPELTIIDVSGADEISTLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRISGINENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSAKFSDSRLSYG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03417 788 Coils Coil 411 431 - -
Tsu08g03417 788 Gene3D Kinesin motor domain 383 769 IPR036961 -
Tsu08g03417 788 Coils Coil 72 92 - -
Tsu08g03417 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 766 IPR027417 -
Tsu08g03417 788 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 MobiDBLite consensus disorder prediction 1 38 - -
Tsu08g03417 788 Coils Coil 362 382 - -
Tsu08g03417 788 Pfam Kinesin motor domain 444 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 PANTHER KINESIN-LIKE PROTEIN 3 788 - -
Tsu08g03417 788 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 788 - -
Tsu08g03417 788 Coils Coil 243 270 - -
Tsu08g03417 788 ProSitePatterns Kinesin motor domain signature. 667 678 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu08g03417 788 SMART kinesin_4 436 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 MobiDBLite consensus disorder prediction 21 37 - -
Tsu08g03417 788 ProSiteProfiles Kinesin motor domain profile. 438 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g03417 788 CDD KISc_C_terminal 436 769 - -
Tsu08g03417 788 Coils Coil 278 326 - -
Tsu08g03417 788 Coils Coil 120 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03417 Tsu-Chr8 51984959 51990711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03417 410 779 Calmodulin-binding Proteins AT5G65930 40.214 6.47e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03417 K10405 - gmx:100818473 1121.69