Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03369 ATGTCTTTCTATAGCCCTCCAAAGTTCATGAAGATTATCCAAAATTATGAACTCAATGTAGCAGAGCTTAGGGTTCCAAAGAAATTTGTGGAGAAATATTGGAAAAGAATACCAGATCCAATAGTCCTTAGACTTCCAAATGGTGCTCAACAAGAAATATTTTGGGTGAAACGTGATAGTGATATTTGGcttcaaaaaaattggaataaaattggaaaatttCTTAAATTTGGATATTCTGTAGTTTTTAAATACATTGGAGGATCATGTTTTCATCTTGCAATATTTGGGCTTGATCATTTAGAAATTGATTATTCTAATATTGAGTTCAAAGATGAAGTTGtgagtgatgatgatgagattAATGccAAAACCCCTGTTATGGATttggatgatgatgatcaaACTAATGTTGCTGGTCCATCTCAAAGAAGAACAAGAGcCAAAACCCCTGTTatcaattttgatgatgatgatgatcaaaCTAATGTTGCTGGTCCATCtcaaaaaagaacaaaagGTACTAAGAGAGATGTGACTAATGAGAAATTTAAGAACAATAATCCAAGTTTTGAAATTAAAGTGAGAGAGAGTACTGGTGCTCACGGCTATACACTTAGAATTCCAAAATACTTTTCAAGAACATACATGAAAGGATTCCAAGGGTTTGCATGGATAAGGGTTGGAGAGGGTAGGCCATGGGAGGACTCTTGGAAGACTTATAAAGGGTATTTGAAGAATAGTGACCTTGCATGGGTTGTAAAATGA 768 0.3021 MSFYSPPKFMKIIQNYELNVAELRVPKKFVEKYWKRIPDPIVLRLPNGAQQEIFWVKRDSDIWLQKNWNKIGKFLKFGYSVVFKYIGGSCFHLAIFGLDHLEIDYSNIEFKDEVVSDDDEINAKTPVMDLDDDDQTNVAGPSQRRTRAKTPVINFDDDDDQTNVAGPSQKRTKGTKRDVTNEKFKNNNPSFEIKVRESTGAHGYTLRIPKYFSRTYMKGFQGFAWIRVGEGRPWEDSWKTYKGYLKNSDLAWVVK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03369 255 Gene3D - 170 251 IPR015300 -
Tsu08g03369 255 SUPERFAMILY DNA-binding pseudobarrel domain 5 98 IPR015300 -
Tsu08g03369 255 SMART B3_2 9 99 IPR003340 GO:0003677
Tsu08g03369 255 CDD B3_DNA 7 96 IPR003340 GO:0003677
Tsu08g03369 255 Gene3D - 3 99 IPR015300 -
Tsu08g03369 255 PANTHER B3 DOMAIN-CONTAINING 5 241 - -
Tsu08g03369 255 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 241 - -
Tsu08g03369 255 MobiDBLite consensus disorder prediction 153 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03369 Tsu-Chr8 51577275 51579925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03369 7 230 B3 DNA Binding Superfamily AT3G18990 25.442 3.81e-19 84.0