Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03333 atgtATCCTAGATTGATACACCCTCATGAAGGAATTGTTGTTGGACAAGATGATTTACAAGGTGGTGGTGTTGGTGGTGTCTCTAATCATAAGGGTGACCCTTGTCTTGTTTTAACTGCTGATCCAAAACCTCGTCTTCGTTGGACTCAAGACCTTCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGTCCTAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAACGTCAAGGGTTTGActctatttcatttaaagagtCATCTTCAGAAATACAGACTCGGGATGACAGGTTCCTATCTTTTAGAAAGCCCCGGCACTGATAACTCTTCTCCAAAGTTGCCGACTTCTGACACAAATGAGGGTTATGAAATCAAGGAGGCATTAAGAGCACAGATGGAGGTGCAAAGTAAACTGCATTTGCAAGTCGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAGCGAAGATACATGGCTATGCTTGAAAGAGCGTGCAAGATGTTGGCTGATCAATTTATCGGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGAATTGAAACTAAAGCACCAAGAGGTTCCTTGGTTGACCATCTTGGTTTTTACTCCTTGCCACCATCTACTGAGGTGGCCGGAGTAAATGTTCCGGAAGAAGAAATACCTCCAACTATCCCACCTCAAAGAGCCGATTGTTCAACCGAAAGTTGTTTAACCTCGCACGAGAGCTCTGGAGGATTGGCTTTAGAAGGATCTCCAAGTGCAGGAAAAAGGAGAATGCTCGGCATGGACTCAATGACAGCGCCTTTGATTTGGACTGAAGCTAAGATGAAAACTCAAGCCATCAATTTAGGTCAAGGTAATCATCCTCTTGGAATAACTAGGTATGGCGGCTTATAA 918 0.4346 MYPRLIHPHEGIVVGQDDLQGGGVGGVSNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGMTGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIETKAPRGSLVDHLGFYSLPPSTEVAGVNVPEEEIPPTIPPQRADCSTESCLTSHESSGGLALEGSPSAGKRRMLGMDSMTAPLIWTEAKMKTQAINLGQGNHPLGITRYGGL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03333 305 Pfam MYB-CC type transfactor, LHEQLE motif 127 172 IPR025756 -
Tsu08g03333 305 Gene3D - 42 99 - -
Tsu08g03333 305 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 303 - -
Tsu08g03333 305 MobiDBLite consensus disorder prediction 226 262 - -
Tsu08g03333 305 MobiDBLite consensus disorder prediction 235 253 - -
Tsu08g03333 305 Pfam Myb-like DNA-binding domain 46 96 IPR001005 -
Tsu08g03333 305 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 97 IPR006447 GO:0003677
Tsu08g03333 305 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 303 IPR044848 GO:0003700
Tsu08g03333 305 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03333 Tsu-Chr8 51051690 51056765 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03333 19 246 G2-like Transcription Factor Family AT3G24120 44.402 1.63e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu08g03333 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03333 - - gmx:100782369 496.893