Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03304 ATGGGTGAAAGAATTCTAGTGTTCCTACTCATTCTTTTCAGTTATTTGTTGGTTGCTGTggtaacaaaaacatcatctgatgattACAATGCACTTACACTTATAAAATATGATTGGAAGAATACGCCGCCAAGTTGGGATAACTCGGATGATCCTTGTGGCGGACATTGGGACGGCATTGTGTGCATCAATTCACGTGTTACCGCCATATCATTGGTAAGCATGGATTTGTTTGGTCAGCTTTCATCAGAGATTGGATCACTATCTGAATTGCAGATTTTGGATTTGTCCTACAATAAGAATTTAACAGGACCGCTTCCGGCTGAAATTGGAAACTTGAAAAAGCTGACAAACTTACAGCTTATTGATTGTGGTTTCTTCGGTCCTATCCCAGATTCGATAGGAAATCTACCACGGCTTGTATTCCTATCTTTGAATTCTAATAGATTTACTGGACCAATTCCAGCTACTATTGGTAATCTCTCGAATCTTTATTGGTTAGACTTAGCAGAAAACCAGCTTGACGGTTCCATCCCAATATCAAATGGAACTACTCCAGGTCTCGATATGCTGCACAAAACAAAACACTTTCATTTTGGGAAGAATAAGCTTTCAGGGAACATTCCAGCTCAACTTTTTAGCTCAAATATGTCTTTGGTACATGTGCTTTTTGAAAGCAACTTCTTTGATGGCAGAATTCCATCTACACTTGGACTTGTACAGAAACTAGAAGTGGTGCGCTTGGATAACAATTCATTAACCGGATCTTTGCCTCAAAACATCAACAATCTTACAAAAGTTAGAGAATTGTTCCTGTCAAACAATCGCCTATCCGGTTCCCTGCCAAACCTTACTGGAATGAATGTCCTCAGCTACCTGGATTTGAGCAATAACAGTTTTGATCAATCAGACTTTCCACCATGGTTATCTACTCTACAGTCTCTAACAACAATAATGATGGAGGATATACAACTTCAAGGACCTATTCCTGTTTCTTTGTTCAACCTGGTACAGTTACAGACACTGAATCTGAAGAAAAATAAGCTGAATGGAACTTTACAAATTGGCACTACATTTAGTGACCAACTGGGACTCATTGATTTGCAGTTTAATAATATTGAAGATGTTGATTTTGATCCACAATTTAATGTCTCTAACGTGGACATAATCCTAGTGAATAATCCAGTTTGCACCGAAACAGGAGTTGTAGAGAATTACTGCTCAATTACAAAACCGAATGACACATATACAACACCGCTAGATAGCTGTATTCTGGTTGAATGCAGCTCGAATCATATATTAAGTCCAAAATGCAAATGTGCATACCCATATACAGGAACTTTAACTCTTAGAGCTCCTTCTTTCTCTGACTTGGGAAACAAGTCAGTGTTTGTAATGCTAGAGAAGACTTTGATGGAGTCTCTAATAAGTCATGATAAACCTGTGGATTCGGTTTCATTAAGCAATCCAAGGAAGAGTACAGATCAGTATCTTGATTTGAGTTTAGAAATATTTCCATCAGACGAAGAATCTTTCAATAGAACCGGTATTTCTGGCATAGGCTTTATGCTTAGCAACCAAACATACAAGCCTCCTGGTGATGTTTTCGGACCATTTTATTTCACTGCTGATAAGTATGAACACTTTCTGGATGATTCAGAAAATGGTCCTGTGAAATCTAGTAAATCGTCAAATATTGGCATCATAGCTGGAGCCTCTATTGGTGGTTGTGTCCTCGTTGTGTTATTACTCCTCGCAGTTGTTTACGGTTTCCGCCAAAAGAATAAGGCAAGAAGAGCAACTAAGAAAAGCAATCTTTTTGAACAATGGGGTCCTGATGAGAGCAATAGTAGCATCCCACAGTTAAAAGGTGCGAGGCGCTTCACTTTCGAAGAGATTCAGAACTGCACCAAAAAATTCGCACAACTCAATTATATAGGATCTGGAGGTTATGGGAAGGTTTATAGGGGAACTCTTCACAATGGACAACTAGTTGCAGTAAAACGAGCTCAAAATGAATCGATGCAAGGAGGGTTGGAATTCAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGTCTTATTGGTTTCTGCTTTGAGCAAGGAGAACAAATATTGGTTTACGAGTATGTTGTGAATGGTACTTTGACAGATGCTCTTTCAGGGAAGTCGGGAATTAGATTGGACTGGATCAGAAGGCTAAAAATAGCCCTTGGTACTGCTAGGGGGTTGGATTATCTTCATGAACAAGCTAATCCTCCTATCATACATAGAGACGTCAAATCCACAAACATTTTACTCGACGAACGTTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGAGTGATGGCGCAAAAGGTTATATGACCACTCAAGTCAAAGGGACAATGGGCTACTTGGATCCAGAATATTACATGACTCAACAATTGACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTAGAGTTGATAACTGCAAGAAGGCCAATAGAAAGAGGGAAATATATTGTGAAAGTGGTTAGGAATTCTCTTGACAAGACAAAAGAATTATATGGTCTTAAGGAAATACTTGATCCTATGATTGATTTCAAGGCATCATTGAAcagttttgaaaaatttattgaTCTTACAATGAAATGTGTTGAAGAGTATAGTTCAAATAGGCCTTCAATGAATTATgcatttaaagaaattgaaaacatGTTGTTGTTGGCTGGCACAAACCCGAATGCTGTATCAGCATCATCTAGTTATAATGCAAGTGGGAGTTCTATGCATCCTTATGATAATGAGTACTTTGATTCAAGTGTGGTACTTCCACCAAGTGCGTAA 2865 0.3766 MGERILVFLLILFSYLLVAVVTKTSSDDYNALTLIKYDWKNTPPSWDNSDDPCGGHWDGIVCINSRVTAISLVSMDLFGQLSSEIGSLSELQILDLSYNKNLTGPLPAEIGNLKKLTNLQLIDCGFFGPIPDSIGNLPRLVFLSLNSNRFTGPIPATIGNLSNLYWLDLAENQLDGSIPISNGTTPGLDMLHKTKHFHFGKNKLSGNIPAQLFSSNMSLVHVLFESNFFDGRIPSTLGLVQKLEVVRLDNNSLTGSLPQNINNLTKVRELFLSNNRLSGSLPNLTGMNVLSYLDLSNNSFDQSDFPPWLSTLQSLTTIMMEDIQLQGPIPVSLFNLVQLQTLNLKKNKLNGTLQIGTTFSDQLGLIDLQFNNIEDVDFDPQFNVSNVDIILVNNPVCTETGVVENYCSITKPNDTYTTPLDSCILVECSSNHILSPKCKCAYPYTGTLTLRAPSFSDLGNKSVFVMLEKTLMESLISHDKPVDSVSLSNPRKSTDQYLDLSLEIFPSDEESFNRTGISGIGFMLSNQTYKPPGDVFGPFYFTADKYEHFLDDSENGPVKSSKSSNIGIIAGASIGGCVLVVLLLLAVVYGFRQKNKARRATKKSNLFEQWGPDESNSSIPQLKGARRFTFEEIQNCTKKFAQLNYIGSGGYGKVYRGTLHNGQLVAVKRAQNESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQILVYEYVVNGTLTDALSGKSGIRLDWIRRLKIALGTARGLDYLHEQANPPIIHRDVKSTNILLDERLNAKVSDFGLSKPLSDGAKGYMTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVRNSLDKTKELYGLKEILDPMIDFKASLNSFEKFIDLTMKCVEEYSSNRPSMNYAFKEIENMLLLAGTNPNAVSASSSYNASGSSMHPYDNEYFDSSVVLPPSA 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03304 954 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Tsu08g03304 954 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Tsu08g03304 954 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Tsu08g03304 954 SUPERFAMILY L domain-like 48 421 - -
Tsu08g03304 954 ProSiteProfiles Protein kinase domain profile. 640 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03304 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 939 - -
Tsu08g03304 954 CDD STKc_IRAK 646 912 - -
Tsu08g03304 954 SUPERFAMILY Protein kinase-like (PK-like) 613 906 IPR011009 -
Tsu08g03304 954 Gene3D Phosphorylase Kinase; domain 1 612 715 - -
Tsu08g03304 954 Gene3D Ribonuclease Inhibitor 286 385 IPR032675 -
Tsu08g03304 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Tsu08g03304 954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 939 - -
Tsu08g03304 954 Pfam Protein kinase domain 642 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03304 954 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03304 954 Gene3D Transferase(Phosphotransferase) domain 1 716 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03304 Tsu-Chr8 50699019 50704684 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03304 8 953 Receptor kinase-like Gene Family AT5G49760 55.462 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tsu08g03304 Pkinase 8.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03304 - - gmx:100782366 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03304 08 50699019 50704684 Tsu08g03304 08 50699019 50704684 ECH