Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03271 atgtTATCTTTGAATGTTTTTCCACCAACATCATCATCGTACTCTGTCACTATCACAAAACCAAATCACCATTTTTCCATCAATGCATCTCACAAACTCAAACCAAATCTTCTTAACAGGTTTCAAAGTTCCAATTTTTCTCTCAAACCCATATCTCAGATCCATCATTCACTCACAAATTCATCTTCTTTCAACAGATTCCTCTCACACCCTTTTGAATTTTCACCAAAACCTAAAACCCAATTTCTCAAAGCTGTTTCTGATGAAGGAGAATCTTCACCTCAAGAAGTTAATCCTAAacctaaaaacatcaaaaaactTGCTTtggtttttgggttttggtattttcaaaacattgttttcaatatttataataaaaaagttttgaaCATTTTTCCATTTCCATGGCTTCTTGCTTCTTTTCAGCTTTTTGTTGGTTCAATTTGGATGCTTGTACTTTGGTCTTCAAAGCTTCAACCTTgtccaaaaatttcaaaacctttCATTTTTGCACTTCTTGGACCTGCTTTGTTTCATACTATAGGTCACATTTCAGCTTGTGTTTCATTCTCAAAAGTTGCTGTTTCATTCACACATGTTATTAAATCTGCAGAACCTGTTTTTTCTGTCATATTTTCTTCTGTTCTTGGTGATAGATATCCAATTCAGGTTTGGCTTTCAATTTTACCAATTGTTCTTGGTTGTTCTTTAGCTGCTGTTACTGAAGTTTCTTTCAATGTTCAAGGATTATGGTGTGCACTTATTAGcaattttggttttgtgttacgGAACATTTATTCGAAAAAAAGTTTGCAAAATTTCAAAGAAGTTGATGGTTTGAATTTATATGGTTGGATTACTATATTGTCATTGTTGTATCTTTTTCCGGTAGCTATTTTTGTCGAAGGGTCTCAATGGATTCCGGGGTATTATAAGGCTCTTGAAGCTATCGGAAAGCCTTCGACTTTTTATATTTGGGTTTTGGTTTCGGGTGTGTTTTATCATCTTTATAATCAATCATCTTATCAAGCATTGGATGAAATTAGTCCATTAACTTTCTCCGTTGGAAATACAATGAAAAGAGTTGTGGTTATTGTGTCTTCGGTTTTGGTGTTCAGGAATCCGGTTCGGCCTCTTAATGGTCTTGGTTCTGCTATTGCAATTCTTGGGACTTTTCTGTATTCACAAGCTACAGCTGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1239 0.3164 MLSLNVFPPTSSSYSVTITKPNHHFSINASHKLKPNLLNRFQSSNFSLKPISQIHHSLTNSSSFNRFLSHPFEFSPKPKTQFLKAVSDEGESSPQEVNPKPKNIKKLALVFGFWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSSKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWCALISNFGFVLRNIYSKKSLQNFKEVDGLNLYGWITILSLLYLFPVAIFVEGSQWIPGYYKALEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAAKKAKKIEGEKSS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03271 412 Pfam Triose-phosphate Transporter family 106 395 IPR004853 -
Tsu08g03271 412 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 34 408 - -
Tsu08g03271 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 395 - -
Tsu08g03271 412 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tsu08g03271 412 PANTHER SOLUTE CARRIER FAMILY 35 34 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03271 Tsu-Chr8 50291457 50292974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03271 26 410 Antiporters AT5G17630 67.225 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03271 K15283 - gmx:100101869 655.595