Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03270 ATGAAAATCCTTGTAGAGAGAAGCCTTGTAACTGTTGACAGTAGGAACAAGCTTAGAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAGTTTATGAGGAATCACCATTTGATCCTGAGAACCGCAGTAGGTTGTGGCGCCATGAGGAAGTGTTTGATATATTATCAAAGAATAAGGGTACAGAACTTGTCAAGGGACTTGCTTTGGAGTTTCcaagaaaaaatacaatttgtGTGAAGACCAAAGCATTTAAGAAGATGAATAAACTTAGATTGCTTCAACTTTCTGGGGTGGAGCTTGAAggagattttaaatatctttcaGGAGATCTTAGGTGGTTGTATTGGCATGGGTTTACATCAACTAACATTCCTGCAGAATTTAAGCAAGAAAGTCTGGTTGCCATCGAATTAAAATATAGTACTCTCAAACAAATATGGAATACGAGCAAGATACTAACGAATCTAAAAATTCTTAATCTTAGTCATTCTCCTTATTTGACGGAAACCCCAGACTTTTCATCCTTGCCTAATCTTGAAAAGCTGGTACTCAAAGACTGTCCAAGTTTGTCTGCGGTCTCCAATAGCATTGGATTTCTCCATAAACTTCTTCTGATAAATTTGACAGACTGCACGGGTCTTCGGAAACTTCCGAAAAACATCTATAAATTAAAATCTCTAGAAACTTTGATTCTTTCAGGATGTTCCAAGATTAATAAATTGGAAGAGGACTTGGAGCAGATGGTTTCACTGACAACCTTGATTGCGGATAAGACTGCTATAACAAAAGTTCCCTTTTCAATTGTGAGGTCAAAAAGCATTGGATATATTTCTTTATGCGGCTTTCAAGGATTTTCACGTGATGTATTTCCTTCTATAATTCAGTCTTGGATGTCATCAAACAATGTGATATCCCGAGTTCTAACACCAGTGTCCATGTCATCTCTTGGTTCTTTTAAGGACCTTCTAAAGCTTCGAATTCTTTATGTGGAGTGTGGCTCAAAACTACAACTAAATCAAGCTGTAGCAAGAATTTTGGATGTATTAAAAGCAACAAATTCCCATAAATTCGAAGCAAGTGCTAGTGCAAGTGAAACTATATCACTGATCTCATATATGAATGCTTCCCCTTCAATTGTTGACTGCCTTGGGCAAGTTCGCCTTTCAGGGCCAAAGAATTACTTAAAATCTCTCTTAATTCACATGAGAACGGAATGCCAAGTCTCAAATATTACCGAATACAGTATTTTTCAGACTGCCGAAGGGATTCGGGATTCGTTTTTGCTCTCCTCTGGCAATAAATCCAATCGCTTTACCTTCAGTTGCAAAGGTTGTTCTATAATATTTGATGTCCCGACAGGGAAGGGGAGGAACCTGAAGAGCATGATGTTTGTCATCCATTACTCTTCCCCGGACAACATAACATCAGAATGTTGTCAAAGTGTGTTGATCATAAATTACACAAAGACAACCATTCAAGCCTATAAAAGAGATACACTAACCTCCTTTAAGGATGACGATTGGAAGAGCATATCATCAAATCTTGAACCTGTAGCCAAGGAGGATGTTATTGTTTCTGGTCATAACAATACGAATGTCAGTGTTTCTAGTGGTTTTAATATTCATGTGCTCTGCTCGGGGACAACAATGTTACTGGTCCTGGTGATTGGTGAAGATCAAAATATAAGGGAAGATAAGCACTTGCATGTAGTGAATAAGAATGCTATTGTTTCTGGTGATGATGTCACAGCAGCAAATAAGAATTATGCTGTAGTACTACACTTTGAAATGGAGAGTTTTAGTTCTGATGTGGAAGCAGCTGGATGCACTGCTGTTTCAGGTCTGATGCAGGCAGAACCTGTGACTGCTTCGTGTCTGATATGGGCCGGTGCTTTGCAGAATGCTACCGCGACTGAGTCTGGTGCACATTTAAAAGAGTTGGGATTGGAATATGCATCCGTGATGGACTTGGTCAATTTGTGCTTTCCACGGAATGGATTGCCCTTCTTTGTAGGAGTGGATGTTGGTGAACTTCTTGAAGAAGTGAATCGAGTTgGTATTGCTATACTTTGGAATAGACAGAGCTTCGGTGTTAATGTACGTATAGCGTCTAATGGATTGCCCTTCTTTGTGAATTGGAAGTTGTTGAAACTCTTGGTGGGAGTTGGTGCTGTGATTTCTTATGGAGGAAGTTGTGATGTCAATAGATGGAAACGAATTTTAAGATTCTTGACTGGTTCTTCAATTACTCTGCAGTCCTCTCAGGTATTACTACACTTTGGAATAGACAGCTTCGGTGTTAATGTACGTATAGCATCTGCAAGCACTGCTGCCATTGCAAAGGTCCGATGCATGCAGAACACGCGACTGCTTCAGCACTGGAATATGCTCCGTGAAGAACTTGGTCAATTTGTGCTTGCAAAGACAGAATGGATTGCGCTTCTTTGTGGAGTGGATGTTGGTGAACCTCTTGACTCTGATCAAAGTGTAGAGGCAAACATGTTGCAGAATATATGGGATAAACTGCAAATCTCAGCATGCTCAACGATAAAGAAATGCCCTGCACAGAATGAGACTAACACAGATGCTATAGATGTCAAGAGTGTAGTCAACCCTATTAGAAGCTTTTTTGGTATTGCTATACTTTGGAATAGACAGAGCTTTGGTGTTAATGTACGTATAGCGTCTGTAAGCACCGCTGCCATTGCAATGAACCTGCGACTGTTTCATTTTCTAATACGGGCTGGTGCGTTGCAGAATGCTATCATGGTTGGTCAATTTGTGCTTGCAAAGACAGAATGGATTGCCCTTCTTTGTGAATTGGAAGTTGTTGAAACTCTTGGTGAGTATATGAATGCTTATTCATAA 2871 0.3936 MKILVERSLVTVDSRNKLRMHDLLRDMGRQIVYEESPFDPENRSRLWRHEEVFDILSKNKGTELVKGLALEFPRKNTICVKTKAFKKMNKLRLLQLSGVELEGDFKYLSGDLRWLYWHGFTSTNIPAEFKQESLVAIELKYSTLKQIWNTSKILTNLKILNLSHSPYLTETPDFSSLPNLEKLVLKDCPSLSAVSNSIGFLHKLLLINLTDCTGLRKLPKNIYKLKSLETLILSGCSKINKLEEDLEQMVSLTTLIADKTAITKVPFSIVRSKSIGYISLCGFQGFSRDVFPSIIQSWMSSNNVISRVLTPVSMSSLGSFKDLLKLRILYVECGSKLQLNQAVARILDVLKATNSHKFEASASASETISLISYMNASPSIVDCLGQVRLSGPKNYLKSLLIHMRTECQVSNITEYSIFQTAEGIRDSFLLSSGNKSNRFTFSCKGCSIIFDVPTGKGRNLKSMMFVIHYSSPDNITSECCQSVLIINYTKTTIQAYKRDTLTSFKDDDWKSISSNLEPVAKEDVIVSGHNNTNVSVSSGFNIHVLCSGTTMLLVLVIGEDQNIREDKHLHVVNKNAIVSGDDVTAANKNYAVVLHFEMESFSSDVEAAGCTAVSGLMQAEPVTASCLIWAGALQNATATESGAHLKELGLEYASVMDLVNLCFPRNGLPFFVGVDVGELLEEVNRVGIAILWNRQSFGVNVRIASNGLPFFVNWKLLKLLVGVGAVISYGGSCDVNRWKRILRFLTGSSITLQSSQVLLHFGIDSFGVNVRIASASTAAIAKVRCMQNTRLLQHWNMLREELGQFVLAKTEWIALLCGVDVGEPLDSDQSVEANMLQNIWDKLQISACSTIKKCPAQNETNTDAIDVKSVVNPIRSFFGIAILWNRQSFGVNVRIASVSTAAIAMNLRLFHFLIRAGALQNAIMVGQFVLAKTEWIALLCELEVVETLGEYMNAYS 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03270 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 533 IPR044974 GO:0006952
Tsu08g03270 956 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 533 - -
Tsu08g03270 956 Gene3D Ribonuclease Inhibitor 57 355 IPR032675 -
Tsu08g03270 956 SUPERFAMILY L domain-like 19 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03270 Tsu-Chr8 50243751 50267999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03270 4 269 WRKY Transcription Factor Family AT4G12020 34.266 2.69e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03270 - - cam:101511908 794.653