Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03246 ATGAGTCCCATACGTGTTATAGGTGTGGCATTTTGGTGTGCAATTGTGTTGCATGCAGGGTATGCTCAGCTTAATCCATGGTTCTATAGGGAAACATGTCCATATTTGTACACTATTGTGCTTAGAGTCATATTTGATGCTTCCCTCACTGATCCACGTATAGGTGCCAGTCTCCTCAGGCTCCATTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTATTGAACAACACTAATAGAATTATAAGTGAGCAAGAAGCACGTCCAAATATAAACTCAATAAGAGGTTTGGATGTTGTCAATAAAATCAAGGCAGCGGTTGAACATGCATGTCCAGCTACCGTCTCTTGCGCCGATATTCTTGCTATTGCAGCTGAAGTAGCTTCTGTtttgGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGGAGGGATAGTTTAACAGCAAATCGAGCTCTTGCAAATCAAAACCTTCCGGCACCCACCTTGACATTGGATCAACTTAAAGCTTCATTTCGTGCTCAAGGTCTTAACACTAGAGATTTAGTTACACTCTCAGGTGCTCATACATTTGGAAGAGCTCATTGCAAAACATTCATTCAACGTCTATACAATTTCAGAAACACTGGAAATCCTGATCAAACACTAAACACATATTACCTACAAAAATTGCGACGATTATGTCCCCAAAATACAACATTGAACAATCTCAACACTTTGGACCTTACCACACCAAATCAATTTGACAACAAATATTATGCCAATCTTCAAAACCACCATGGCTTACTTCAAACTGACCAAGAGCTATTCTCTACTCCTAATGCTGATACAATTGATATTGTTAATAGCTTTAGTAGTAACCAagcttttttctttgaaaattttagggtttcaaTGATTAAAATGGGATATATTGGTGTGTTAACTGGTAAAAGAGGGGAAATTAGGTCGCATTGTAATTTTGTTAATAGTGATTACTCTCAATTAGTTGGTGGTGCatcaaaagattcaaaagaTGGGCTTTCTTAA 1035 0.372 MSPIRVIGVAFWCAIVLHAGYAQLNPWFYRETCPYLYTIVLRVIFDASLTDPRIGASLLRLHFHDCFVQGCDGSVLLNNTNRIISEQEARPNINSIRGLDVVNKIKAAVEHACPATVSCADILAIAAEVASVLGGGPSWPIPLGRRDSLTANRALANQNLPAPTLTLDQLKASFRAQGLNTRDLVTLSGAHTFGRAHCKTFIQRLYNFRNTGNPDQTLNTYYLQKLRRLCPQNTTLNNLNTLDLTTPNQFDNKYYANLQNHHGLLQTDQELFSTPNADTIDIVNSFSSNQAFFFENFRVSMIKMGYIGVLTGKRGEIRSHCNFVNSDYSQLVGGASKDSKDGLS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03246 344 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 Gene3D - 28 325 - -
Tsu08g03246 344 CDD secretory_peroxidase 23 324 IPR033905 GO:0004601|GO:0042744
Tsu08g03246 344 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tsu08g03246 344 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 PANTHER PEROXIDASE 7 332 - -
Tsu08g03246 344 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Tsu08g03246 344 PANTHER PEROXIDASE 72-RELATED 7 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03246 344 Gene3D Peroxidase, domain 2 161 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03246 Tsu-Chr8 49869359 49871592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03246 6 325 Peroxidase AT5G06720 55.625 1.79e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03246 K00430 - gmx:548068 499.204