Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03244 ATGAACTCCCTTCGTTTCATAGGTCTTTGTTGTGTAGTGCTTGTGTTTGGAGGATTACCCTTCTCCTCAAATGCACAACTTGATCCATTGTTTTACAGTAAAACTTGTCCCCAATTGCACTCCATTGTTAAAGAAATCATACTGAATGTTACTAGGATTGATCAACGTGCCCATACATTTGGAAGAGCACGTTGCATTTTCATCGTCGATCGATTATATAACTTCAGCAATACCGGTCAACCCGATCCAACTCTTGATACAACATACTTACAAGTATTGCAAAAACAATGTCCTAGAAATGGATCCGGAACTAGTGTCTTTTTTGACCCAACTACTCCTATTAGAATGGACAACAAATTCTACAACAACCTTCAAGTTAAAAAAGGTTTATTACAAAGTGACCAAGAGTTGTTCTCAACACCAGGTGCAGATACCATTAGTATTGTCAATCGCTTTGCCAATAATCAAACAATTTTCTTCCAGAACTTAAGGAATTCGATGATTAAAATGAGTAAGATTGGTGTGCGTACGGGAACACAAGGTGAAATTAGAAAACATTGCAACTTTGTTAACAAGAAAACTTCTGAATTGGATCTTGGCATAGAATTATTAGAGGAGGGTGATATGGTAAATTTGAAAGAACTATCCCTTGGAAAGCAAAAAAGAGAACAACCCGAAATGGAAAGCATAACAACGGTGAATGAATCAGCTGCCAACATAGAAAACGACCCAAATACCAACCGCtctttgcaaaataataacaagcCAAAACAACCCTTTCGAGCCACAACTTGTTGTCAAACCGAAGGAGAGACACACCCCATCACCTTTGACGAAGCTTTGACGGATCACAAAACCACTGTGACGATCGAATCAGACGACGTAGATGCAAAACCAAAATCGTTATTAAAAAACATCCTGAACGAATTTAGAGAACCCAAACCCGAATAG 951 0.3775 MNSLRFIGLCCVVLVFGGLPFSSNAQLDPLFYSKTCPQLHSIVKEIILNVTRIDQRAHTFGRARCIFIVDRLYNFSNTGQPDPTLDTTYLQVLQKQCPRNGSGTSVFFDPTTPIRMDNKFYNNLQVKKGLLQSDQELFSTPGADTISIVNRFANNQTIFFQNLRNSMIKMSKIGVRTGTQGEIRKHCNFVNKKTSELDLGIELLEEGDMVNLKELSLGKQKREQPEMESITTVNESAANIENDPNTNRSLQNNNKPKQPFRATTCCQTEGETHPITFDEALTDHKTTVTIESDDVDAKPKSLLKNILNEFREPKPE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03244 316 MobiDBLite consensus disorder prediction 219 261 - -
Tsu08g03244 316 MobiDBLite consensus disorder prediction 229 261 - -
Tsu08g03244 316 PANTHER PEROXIDASE FAMILY PROTEIN 5 56 - -
Tsu08g03244 316 PANTHER PEROXIDASE FAMILY PROTEIN 57 202 - -
Tsu08g03244 316 SUPERFAMILY Heme-dependent peroxidases 57 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu08g03244 316 PANTHER PEROXIDASE 72-RELATED 57 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03244 316 PANTHER PEROXIDASE 72-RELATED 5 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g03244 316 Gene3D Peroxidase, domain 2 57 170 - -
Tsu08g03244 316 Pfam Peroxidase 57 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03244 316 ProSiteProfiles Plant heme peroxidase family profile. 20 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g03244 316 Gene3D - 171 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03244 Tsu-Chr8 49851761 49855622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03244 57 205 Peroxidase AT4G08770 54.305 4.27e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03244 K00430 - gmx:112997743 203.371