Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03221 atgaaatttgtGGTGAGTGTTTACCTTATACTATGTTTTGCCTCTTCCATTTTCATTGTAATGGCAATAGTACAAAGAACACAACATATTTTTGGAGGTGATGAATACTATGTTCGTGTGATTAATGGTTTCACTGATAATTCTTCTGTTCCTTTAGTTATTTGGTGTTCATCAGAAGAAATGGATCTTGGTGGTCGTGCTTTACAAGAACATGATGAATTTAGTTGGATCATGAGGCCAAATCTTTGGAGTAGCAATTATATGAAGTGTACAATGAAATGGGATAGCACAAGGAAGAGTTTTGAAGCTTTTGAGGCTTCTAGAGACATAGAACGTTGTGGATTACATAGGTTATGTTCTTGGAGGGTTACACAAGATGGGTTTTATTTTAGTAATGATGAAGTTAATTGGAGGAAGGATTTCATGTGGTGA 432 0.3472 MKFVVSVYLILCFASSIFIVMAIVQRTQHIFGGDEYYVRVINGFTDNSSVPLVIWCSSEEMDLGGRALQEHDEFSWIMRPNLWSSNYMKCTMKWDSTRKSFEAFEASRDIERCGLHRLCSWRVTQDGFYFSNDEVNWRKDFMW 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03221 143 Pfam Plant self-incompatibility protein S1 38 143 IPR010264 -
Tsu08g03221 143 PANTHER - 8 143 IPR010264 -
Tsu08g03221 143 PANTHER BNAA01G23250D PROTEIN 8 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03221 Tsu-Chr8 49389178 49389814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03221 50 127 Carbohydrate Esterase AT3G16970 30.380 1.46e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03221 - - gmx:100792052 257.299