Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03195 ATGATGGGGAGGGTGATTGAGGAAAGACTATTGATTGTGTTGATTTTGGTGATAGTGAGTTTTAGTGTAGAGGCTCAACAAAAGTCAATTCTTATAAATTGTGGTTCAAATTCTACTATGAATGTTGATGGTAGGAGATGGATTGGTGATATGGTATCTAATAACAATGTTACCTTGAATTCTTCTGGTGTTGTTGCTTCCACTGATGCATTAAGCGGAAATTCGATTTATGAGCCACTTTATAGAACAGCTAGAATTTTCACAGATTCTTTGAATTACACAATCAAAGGTGTTCatggaaactatttttttaggTTCCATTTATGTCCTTTTGAGATTGTGGATCATAATGTGAATGAGTCTTCTTTTGGTGTTGTTGTCAATGGTATGAAACTTTTGTCGGAGTTTAGTGTTCCGGGTAAGATATCTGAAAAGAATGTGAATTTGCTTAATGCTGGAAAGAATTCAAGTTCATTCTTTTTGATTAAAGAGTATATTCTTGATGTTAATGATGATAAGCTTGTGATTGAGTTTATTCCGAGTAGAAACTCATTTGGATTCATTAATGCTATTGAGATTGTTCCGGTTGTTGGCGAGCTTTTTGATGGCTCAGTTAGTAAAGTTGGTGGCAATGGAAACTTGAATTTGACTGGTCGTGCGATGGAGACTATGTATAGGTTAAATGTTGGTGGTCCTGAGATTCAATCCAATCAGGATCCGGATCTTCGTAGACTTTGGGAAGTTGATTCTAGTTACATGATCACGGAAAACGCCGGTGAAATGATTAAGAGCAGCTCAAATATTACATATGCTTCTGTGAATGATACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCCAACACTGAAGTATTGGACAAAAGATTTAACATGTCGTGGAAATTTGAAGTAGATCCCGATTTCGATTACATGGTTCGGTTGCATTTCTGTGAGTTGGCGTATGATAAGTCGAACGAGAGAGTATTCAGGATCTACATAAACAACAGGACAGCAGCGAATAATCTCGATGTTTTTGTTCGAGCAGGAGGGAAGAATAAAGCGTATCACCAGGATCATTATGATCCTGTGTCGTTGAGGATTGACACACTTTGGGTTCAACTAGGTCCTGATACTTCTGCTGTTGCTGCGGGAACCGATGCTCTCTTGAATGGTCTAGAGATTTTTAAGCTTAGTCGAAATGGGAATCTCGCCTTCGTGGAAAAATTCGACTTGGCTGGGAATTCAGGAAGCAAATCAAACTCAAAACTTCTTTGGGTTGGTATAGGAGCAGGTGTAGCTTCTGTAGCTATAATTGCATGTATTGGTGTCTTTGTTTTCTGTTTCTGCAAAAGAAGGAGAATAGAGTCAAGCGATACCAAAAACAATTCTCCAGGTTGGCGACCGATATTCCTTTATGGCGCGGCTGCTGTAAACAGCTCTGTAAGTGGCAAGGGATCAGCAGGAAACCAAAAGTTATATGGATCCGTGGCTTCAACCGGAGCTGGTAAGCGGTTTACGCTGGCTGAAATCAACGCTGCAACAAATAATTTCGATGAGAGTTTGGTCATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGAGAGGTTGATGATGGTGTGCCTGCTGCAATTAAGCGCGCCAATCCGCATTCTGAACAAGGTCTGGCTGAATTCGAGACCGAAATCGAGATGCTCTCAAAACTAAGACACAGACATTTGGTGTCTTTGATTGGTTTCTGTGAAGAGAAAAGTGAAATGATTTTGGTTTATGAATACATGGCAAATGGAACTCTAAGAAGTCATCTATTTGGTAGTGATCTCCCTCCACTAACTTGGAAGCAACGTCTTGAAGCCTGCATCGGTGCTGCAAGGGGACTTCACTACCTTCACACAGGAGCCGACCGTGGAATAATTCACCGAGATGTCAAAACAACCAATATACTGTTAGACGAGAATTTTGTAGCGAAAATGGCTGATTTCGGTTTGTCAAAAGACGGTCCTGCTTTTGAACATACTCATGTTAGCACTGCTGTGAAAGGAAGTTTCGGCTATCTCGATCCAGAGTATTTCAGAAGACAACAGTTAACTGAGAAATCAGACGTTTACTCTTTTGGAGTTGTTCTGTTTGAAGCTGTTTGTGCTAGAGCTGTGATAAACCCTACCTTGCCTAAAGATCAGATCAACCTTGCAGAATGGGCAATGAGATGGCAAAGAGAAAGATCACTCGAAAAAATCATCGATCCAAATCTTATAGGAAATTATTGCCCTGAATCTTTGTCTAAGTTTGGGGAGATAGCCGAAAAATGTCTCGCTGATGATGGTAAAAGCCGTCCCACGATGGGAGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTACACGAAGCTTGGCTCAACAAGGACAACAGCACAAATAATTCCTTCGCTAGCAGTCAAGCTTTGAGTGGTCCACAAGACGAAGGAGTTGAAGTTGCGAAGGAGCATCCAAATCAAGATGAAGAGGTTGATTTGGATTCAAAAAATACAATTGATTCGGTCCGAGAAATGAGTGCTGCAATGTGA 2574 0.4068 MMGRVIEERLLIVLILVIVSFSVEAQQKSILINCGSNSTMNVDGRRWIGDMVSNNNVTLNSSGVVASTDALSGNSIYEPLYRTARIFTDSLNYTIKGVHGNYFFRFHLCPFEIVDHNVNESSFGVVVNGMKLLSEFSVPGKISEKNVNLLNAGKNSSSFFLIKEYILDVNDDKLVIEFIPSRNSFGFINAIEIVPVVGELFDGSVSKVGGNGNLNLTGRAMETMYRLNVGGPEIQSNQDPDLRRLWEVDSSYMITENAGEMIKSSSNITYASVNDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYMVRLHFCELAYDKSNERVFRIYINNRTAANNLDVFVRAGGKNKAYHQDHYDPVSLRIDTLWVQLGPDTSAVAAGTDALLNGLEIFKLSRNGNLAFVEKFDLAGNSGSKSNSKLLWVGIGAGVASVAIIACIGVFVFCFCKRRRIESSDTKNNSPGWRPIFLYGAAAVNSSVSGKGSAGNQKLYGSVASTGAGKRFTLAEINAATNNFDESLVIGVGGFGKVYKGEVDDGVPAAIKRANPHSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKSEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWAMRWQRERSLEKIIDPNLIGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNKDNSTNNSFASSQALSGPQDEGVEVAKEHPNQDEEVDLDSKNTIDSVREMSAAM 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03195 857 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Tsu08g03195 857 ProSiteProfiles Protein kinase domain profile. 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03195 857 SUPERFAMILY Protein kinase-like (PK-like) 500 793 IPR011009 -
Tsu08g03195 857 CDD STKc_IRAK 527 792 - -
Tsu08g03195 857 PANTHER OS07G0166700 PROTEIN 19 837 IPR045272 GO:0004714|GO:0006468
Tsu08g03195 857 MobiDBLite consensus disorder prediction 825 847 - -
Tsu08g03195 857 Pfam Malectin-like domain 32 400 IPR024788 -
Tsu08g03195 857 PANTHER OSJNBA0058K23.13 PROTEIN 19 837 - -
Tsu08g03195 857 MobiDBLite consensus disorder prediction 811 857 - -
Tsu08g03195 857 SMART serkin_6 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03195 857 Pfam Protein tyrosine and serine/threonine kinase 526 788 IPR001245 GO:0004672|GO:0006468
Tsu08g03195 857 Gene3D Transferase(Phosphotransferase) domain 1 597 818 - -
Tsu08g03195 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Tsu08g03195 857 Gene3D - 25 196 - -
Tsu08g03195 857 Gene3D - 219 403 - -
Tsu08g03195 857 Gene3D Phosphorylase Kinase; domain 1 485 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03195 Tsu-Chr8 49079724 49083006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03195 8 818 Receptor kinase-like Gene Family AT1G30570 64.951 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu08g03195 Malectin_like 6.4e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03195 - - mtr:MTR_2g030310 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03195 08 49079724 49083006 Tsu08g03195 08 49079724 49083006 ECH