Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03193 AtgaagttttttatatttttagtgttATGTTTATCTTTCTTTACCATTATGGGACAGCTTCCATCACAGGACATTTTAGCATTGTTAGAATTTAAGAAATGTATCAAGCATGACCCTACTGGTTATGTCCTCAATTCGTGGAACGAGGAATCCATTGACTTCGATGGATGTCCGTCTTCATGGAATGGCGTTCTTTGTAACGGTGGTAATGTTGCTGGTGTTGTCCTTGATAACTTAGGTCTTTCAGCTGATACTGATTTGAGTGTTTTTTCTAATCTCTCAAAGCTTGTAAAACTTTCTATGTCAAACAATTCAATATCCGGAAAATTACCTAACAATATTGCCGATTTCAGAAGTCTTGAATATCTTGATATTTCTAATAACCTCTTTTCCTCGTCTATACCGATTGGTATCGGTAAGTTTGGTAGTTTGCAGAATCTGTCATTGGCTGGGAATAACTTTTCCGGCTCAATTCCGAATTCTATTTCGGAAATGTCTTCAATAAAATCTTTGGACTTCAGCCGTAACACCCTTTCTGGATCTCTTCCGTCGTCATTGACTAAGCTGAATAGTCTTGTATCTCTTGACTTGTCTCACAATGGCTTCACCGGAAAAATTCCGAAAGGTTTTGAGCTTATTTCCAGCCTTGATAAACTCGATTTGCACGCAAATATGTTCAACGGTCCTTTAGATGTTGAGTTTATGCTTTTATCAAGTGTTAGCTATGTTGATTTAAGCGATAACATGTTGCTGAGTTCTGATTCTGGTAAATTTCTACCGGGAATATCCGAAAGTATTAAGTATCTGAATCTTAGCCACAACCAGCTTACTGGTATATTAGTCGGTGGAGCCGAACAACCTCTTTTCCAAGACTTGAAGGTGTTGGATCTCAGCTATAACCAACTGAACGGAGAATTACctggatttgattttgtttatgatcTCCAAATCCTTAAGCTTAGCAACAACAGATTTTCAGGTTTTATTCCTAATGGCTTACTTAAAGGAGATTCTTTGGTTTTAACTGACCTTGATTTGAGTGCCAACAATCTCTCAGGGCCATTGAGTATGATTACATCGACAACACTTAACTTTCTTAATCTCTCGTCGAATGGTTTCACCGGTGATCTACCACTGCTTACTGGAAGTTGCGCTGTACTTGATCTGTCAAATAACAAATTTGAAGGAAATTTAACTAGGATGTTGAAATGGGGGAACATAGAACAACTCGATCTCAGTGGGAATCGTTTGGCAGGGAACATCCCTGAGGTAACTCCTCAGTTTTTGCGATTGAACTATTTGAATCTATCCAATAATCATCTCAGTGACGACCTTCCGAAAGTGTTAACACAGTATCCAAAGCTTAGAGTGCTTGATATCAGTTCCAACCAATTAAAAGGCTTTCTTCCAGCCGATTTTTTCACAATGCCGACATTACAAGAGCTCCatcttgaaaataatttgatcaaTGGTGGCATCAATTTGTCGTCTTCTCTTGACCAATCTCATCTTCAAGTTCTTGATCTTTCTCACAACCAACTTAGTAGCTTTTTCCCTGATGAGTTTGGATCATTAACTAGCCTGAGAGTGCTCAACATTGCTGGAAATAACTTTGTTGGTTCTCTTCCAACCACTATTGCTGACATGAGTTCTCTAGACTCATTGGATATATCGGATAATCGTTTCACTGGTCCACTTCCAAATAACATGCCAAAGGAACTCAAAGACTTCAATGCTTCCGAAAATGATCTATCTGGAGTTGTCCCTGAAATTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCAGGGAATTCTAAGTTACATTTTCCAAATAGTCCTCCTGGATCAACCGTTTCAGCGACCGATAGTTCCAAGGAGAAGAAGTCTATGACCACAGCCGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTGATATTAATCTTACTTGCTGTTTTCATACATTACATACGTATGTCAAGATCTTCAACACCAGAATATGATGCGAGTAAGGATTTCCGCAGTCGCCCTCAACCAGTTATCTCTGGACCTATTCGACCAACAGAGAGAGGCGGTCCTTTGGTTGTATCAGCCGAGGACCTCGTGGCTTCACGTAAAGGATCACCATCAGAAATAGTTAGCCCTGACGAAAAAACTGCAGCTGTATCTGGATTCTCCCCATCAAAACACAGCCACTTTTCATGGTCACCTGAGTCTGGTGATTCATTGACCgctgaaaatctttcaagacTAGATACGAGGTCGCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAACATCGTTGACACCTGAGGAGCTATCGAGGGCACCGGCTGAAGTTTTGGGAAGAAGTAGTCATGGTACTTCTTACAAGGCAACTATGGATAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCGAAACAGAGGAAAGAGTTTGTTAAAGAGATAAGAAAGTTTGCAAACATCAGGCATCCAAATGTTGTCGGTTTGAAAGGTTATTATTGGGGTCCTACGCAGCATGAGAAGCTCATTCTTTCAGATTACATTTCACCAGGAAGTCTTGCAAGTTTTCTTTATGATCGACCGGGAAGAAACGGTCCGCCATTAACATGGGCTCAGAGACTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTCGACCGAGCTGTTCCTCACGGGAACCTTAAAGCTACAAATGTGTTGTTAGATACAGCTGATATGAATGCACGCGTTGCTGATTATTGTCTTCACCGACTTATGACTCAGGCTGGTACTATTGAACAGATTCTTGATGCTGGTGTTTTAGGTTACCGTGCGCCGGAGTTAGCTGCTTCTAAGAAACCAATGCCTTCCTTCAAGTCAGATGTCTATGCTTTCGGCGTGATACTTTTGGAACTTTTAACCGGAAGATGTGCTGGTGATGTGATATCCGGTGAAGAAGGCGGCGTTGATCTTACAGATTGGTTAAGATTACGAGTAGCCGAAGGTCGAGGCTCGGAATGTTTTGATGCTACTTTGATGTCAGAAATGGGAAATCCAGTTGTAGAAAAGGGAATGAAGGAGGTCCTAGGAATAGCGATTCGATGTATCCGATCAGTTTCTGAAAGGCCGGGAATCAAGACTATATATGAAGATCTATCTTCTATATAA 3192 0.3991 MKFFIFLVLCLSFFTIMGQLPSQDILALLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLSKLVKLSMSNNSISGKLPNNIADFRSLEYLDISNNLFSSSIPIGIGKFGSLQNLSLAGNNFSGSIPNSISEMSSIKSLDFSRNTLSGSLPSSLTKLNSLVSLDLSHNGFTGKIPKGFELISSLDKLDLHANMFNGPLDVEFMLLSSVSYVDLSDNMLLSSDSGKFLPGISESIKYLNLSHNQLTGILVGGAEQPLFQDLKVLDLSYNQLNGELPGFDFVYDLQILKLSNNRFSGFIPNGLLKGDSLVLTDLDLSANNLSGPLSMITSTTLNFLNLSSNGFTGDLPLLTGSCAVLDLSNNKFEGNLTRMLKWGNIEQLDLSGNRLAGNIPEVTPQFLRLNYLNLSNNHLSDDLPKVLTQYPKLRVLDISSNQLKGFLPADFFTMPTLQELHLENNLINGGINLSSSLDQSHLQVLDLSHNQLSSFFPDEFGSLTSLRVLNIAGNNFVGSLPTTIADMSSLDSLDISDNRFTGPLPNNMPKELKDFNASENDLSGVVPEILRKFPSSSFFPGNSKLHFPNSPPGSTVSATDSSKEKKSMTTAVKVIIIVSCVVALLILILLAVFIHYIRMSRSSTPEYDASKDFRSRPQPVISGPIRPTERGGPLVVSAEDLVASRKGSPSEIVSPDEKTAAVSGFSPSKHSHFSWSPESGDSLTAENLSRLDTRSPDRLIGELHFLDDTTSLTPEELSRAPAEVLGRSSHGTSYKATMDNGLLLRVKWLREGVAKQRKEFVKEIRKFANIRHPNVVGLKGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTDWLRLRVAEGRGSECFDATLMSEMGNPVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03193 1063 MobiDBLite consensus disorder prediction 669 691 - -
Tsu08g03193 1063 SUPERFAMILY L domain-like 43 378 - -
Tsu08g03193 1063 Gene3D Ribonuclease Inhibitor 265 617 IPR032675 -
Tsu08g03193 1063 ProSiteProfiles Leucine-rich repeat profile. 503 524 IPR001611 GO:0005515
Tsu08g03193 1063 PANTHER OS07G0626500 PROTEIN 2 1063 - -
Tsu08g03193 1063 MobiDBLite consensus disorder prediction 606 625 - -
Tsu08g03193 1063 Gene3D Ribonuclease Inhibitor 138 255 IPR032675 -
Tsu08g03193 1063 PANTHER - 2 1063 - -
Tsu08g03193 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03193 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Tsu08g03193 1063 Pfam Protein tyrosine and serine/threonine kinase 785 983 IPR001245 GO:0004672|GO:0006468
Tsu08g03193 1063 SUPERFAMILY L domain-like 289 592 - -
Tsu08g03193 1063 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Tsu08g03193 1063 Pfam Leucine rich repeat 502 562 IPR001611 GO:0005515
Tsu08g03193 1063 Pfam Leucine rich repeat 430 489 IPR001611 GO:0005515
Tsu08g03193 1063 Gene3D Phosphorylase Kinase; domain 1 772 858 - -
Tsu08g03193 1063 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Tsu08g03193 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1060 IPR011009 -
Tsu08g03193 1063 Gene3D Ribonuclease Inhibitor 24 137 IPR032675 -
Tsu08g03193 1063 SMART LRR_typ_2 93 116 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 428 452 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 453 476 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 525 548 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 189 212 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 312 336 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 502 524 IPR003591 -
Tsu08g03193 1063 SMART LRR_typ_2 117 141 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03193 Tsu-Chr8 49059574 49064301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03193 26 1063 Receptor kinase-like Gene Family AT5G56040 27.489 4.42e-77 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu08g03193 PK_Tyr_Ser-Thr 1.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03193 - - gmx:100793639 1696.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03193 08 49059574 49064301 Tsu08g03193 08 49059574 49064301 ECH