Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03135 ATGCTAGTAGATGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTCGAAGGAAAGGTTGAAGAGTTCATCAACGAGTTTGTTGTTCTTTCACAAATCAATAACAGAAATGTTGTCAAATTATTAGGATGTTGTTTGGAGACAGAAATTCCACTGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTTCGAGTACTTGCATGACCAAAATGACGACATACCGATGACATGGGACATGCGTTTGAGAATCGCCACTGAAATTGCTGGAGCTTTATTTTACTTGCACTCAATTGCATCTCAACCGATTTATCATAGAGACGTTAAATCAACAAATATACTATTGGACGAAAAGTATAGAGCGAAATTAGCAGATTTTGGAACATCGAGAATAATTTCAATCGAAGCTACTCACCTTACCACAGTGGTTCAAGGTACTTTTGGTTACTTAGACCCTGAATATTTTCATACCAGTCAATTTACCGCAAAAAGTGACGTGTACAGCTTTGGAGTAGTTCTCGCTGAACTTTTAACTGGTAAGAAGCCAATATCCTCAGTAGGATCGGGGGAATTCCAAAATTTAGCTTCCTATTTTGTTCAGTGTATAGAGGACAATATATTGTTTGACATTGTTGACGAAAGGGTCACAAAAGAAGGGGAGAAAGAACATATCATTGCAGTTGCAAATCTTGCATATAGATGCTTAGAGTTGAATGGACGAAAACGACCAACAATGAAAGAAGTTACATTAGAATTGGAAGGGATCAGGGGATTGAATAAGAAGCTTAATGTACAACAAAACCATGAAGAAATTGAGCTTGCAGGAATTGAAGATTACCAACATTGGGATGGATTTTCTGCAACAAATTCATTCCCAATTGTTGACAGCCAAACATACTCCACAGACTCGGAAGTTATGCATATTATTGCATTAAAGTag 936 0.3654 MLVDGKIVAVKKFKVEGKVEEFINEFVVLSQINNRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHDQNDDIPMTWDMRLRIATEIAGALFYLHSIASQPIYHRDVKSTNILLDEKYRAKLADFGTSRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTAKSDVYSFGVVLAELLTGKKPISSVGSGEFQNLASYFVQCIEDNILFDIVDERVTKEGEKEHIIAVANLAYRCLELNGRKRPTMKEVTLELEGIRGLNKKLNVQQNHEEIELAGIEDYQHWDGFSATNSFPIVDSQTYSTDSEVMHIIALK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03135 311 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 309 - -
Tsu08g03135 311 Pfam Protein tyrosine and serine/threonine kinase 7 250 IPR001245 GO:0004672|GO:0006468
Tsu08g03135 311 Gene3D Transferase(Phosphotransferase) domain 1 57 279 - -
Tsu08g03135 311 SMART serkin_6 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03135 311 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 309 IPR045274 GO:0007166
Tsu08g03135 311 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03135 311 PIRSF ILK 1 269 - -
Tsu08g03135 311 SUPERFAMILY Protein kinase-like (PK-like) 3 249 IPR011009 -
Tsu08g03135 311 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Tsu08g03135 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03135 Tsu-Chr8 48175472 48176407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03135 1 305 Receptor kinase-like Gene Family AT1G79680 55.380 5.20e-119 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tsu08g03135 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03135 - - mtr:MTR_2g031530 554.288