Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03069 ATGTATAGAGAAAATGGTATTCTTTTTCCATGGTCATATCTACACAATTTCTCTCAAGAGCTTCATCAACTTGAAGAGTATTGCCAAACCCAGAAGTTCAATGCTTCAATGGGTGACCTTTTTCAGTTTTCTGCAATGTCCGAGTATGATTTTGCAGCTGAAGGAGATCTGTTCAAAGCACCTGAACCGATTATCGAAGAACCAGGCATTGACATGGATCCCATGACATCGGCGATCTCAATGATATCTTGTGGCGAGGATGTAAAATCTGCAGATATTTCTATTCTTCAAAACGAACAACTTCTCAGCGATGTATTCTATGATTGCAAAAAGGATCTATTCGAAAAGACAGCAATGGAGTCACCACTCTCTGAGATTCTTGAAATCAAGGTTCCACTATTGAGCATTGACGAGAACACAATTCAAGAAAACAGACAACTTCCTGACATGACATTACCGAAGAGCGTCAGCTCGGGATGTTTAAGCTCAATGGACTGGATGCATGGATCTGCAGCAATGAAGCCTGCTTTCCTCGGTGTCTCAGAAATAGATTTTGATGCAGTTTATGGCATGAGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGCAACGGTAATATGAACACTGTCGAATCTCCTCGAGAGAGGCCCTTTTTTACTAGCAGCGAGGAGCGCTTACAAAAGCTCTCTAGATACAGAAACAAGAAGGCAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCACTAGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATCTGAGACAAATAGGGAATGA 831 0.4128 MYRENGILFPWSYLHNFSQELHQLEEYCQTQKFNASMGDLFQFSAMSEYDFAAEGDLFKAPEPIIEEPGIDMDPMTSAISMISCGEDVKSADISILQNEQLLSDVFYDCKKDLFEKTAMESPLSEILEIKVPLLSIDENTIQENRQLPDMTLPKSVSSGCLSSMDWMHGSAAMKPAFLGVSEIDFDAVYGMRRSFSEGDIKTLGNGNMNTVESPRERPFFTSSEERLQKLSRYRNKKAKRNFGRKIKYACRKALADSQPRIRGRFAKNEESETNRE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03069 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 273 - -
Tsu08g03069 276 ProSiteProfiles CCT domain profile. 226 268 IPR010402 GO:0005515
Tsu08g03069 276 Pfam CCT motif 226 268 IPR010402 GO:0005515
Tsu08g03069 276 PANTHER CCT MOTIF FAMILY PROTEIN 28 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03069 Tsu-Chr8 47204420 47208419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03069 222 274 C2C2-CO-like Transcription Factor Family AT5G57660 50.943 3.04e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu08g03069 CCT 7.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03069 - - gmx:100814332 410.223