Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03065 ATGGCACTCTGTAGAACTGGGCCATACCCAATTTTGGAGAGTAATGGCCTAGGTTACTCGCATATAAATTTGTCGACAAAACTTGTTTTACCTGTTCCCCTGCGTTTCGCTGGACCGTTATCTAATGTAGGCAAGAGAAAGCACAAGGGAGTATGCAGTTCATCACTACGGAGAGCTGCATCTGCTTCTTCAATGGAGTCACATGAACAGGATACAAATACCGTTTCGGTTTGCTCGGAGGAGGAAACTGATCATGTTATAAGGTTCAACATGTCAGATTTTAAGGTTTTAGATCATGTTAGCATTGGCCTCGGTGGACGGGCGGATGAGGTGGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACTAGAGTTATACTTCGACAGCTTTACAGTGCCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGCCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGTTACATCTCTCTGCCTGGGGATTCAAGTCTTGATAGTGGTTCATTTATCCTAGTTCATGGGTATCATGGTAGTTTTTCTTTGAGGCACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTGGACGAAGATTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCCGCGATTTCTAGGCAATTGCGAGTTATTCGAATATTGATGAGAGATCTTCTAATTGGAGTAAATTACCTGCATAGTCATGGTCTTGCCCATACAGAGTTAAGGCTGGAAAACGTGCATATAAGTCCAATAGACAGACATATCAAAGTAGGTATACTGGGAAATGCGGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCTATGGAAAACATGGACAGGCGAAAGATGATGATTGCTTTTGATATGAGATGCGTGGGTTTCATAATGGCCAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCATTCTTCACACAGGGGAATGATCCTTCATGTTTGCGACAGTTTATGTTGGAAATCCTCGGTAGAAATTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACCAAACCTTCTCAGAGGATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGCGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTGGGTTGTACCGCAATGCGTATTAGTGAGGAGTACATTTACCGTCAGCCTCAGCGCAGGAGGCTTGCCCATTTCATTGACTTAATGGAGATGTTGAACCCTCATCCAAAGCCAAAGAACTGGCTGGAGTTGCTTCCAGGCAAATGGCGTCTATTATACTGCACAGGGAAGCATGTTGGGTTGACCCTTCGCCAACCTCCTGTCCGTGTTCTAGTTGGAGATTTGCATTTAACTGTTGCAAAAGAATCAAAGTTGAAGGCCAACCTTTCATTCGTCTCTGACATTGGATTCTCAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGATTGCAGGTGAATTCTTCATTTACACTAAGAGCTGGGAGACGGTTATATCTAAAGCAAGACAATACCTCAGAGAAGCTCTCCTTTCGCCCTTCTGGCAATGAGGAGGCATTAGCTCAGAAATTTGCTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGTTTGCATCAGGCGATGATATTGACGTGACAATGAATCTTGATGATCCTTTAAATCAAAACATGGATACTGTAAAAAATGTTCTTCAAGAACTAAGAACACAAATTCCCCctgaaatatttgatttgtcaaAGATTGTCTGTGGAACTTATGTGGACTCGAGGCTGCTTGTTCTTCGAGGGGTTAATGGATCCGCTCTCCTATTTACAAGGTCTTTTGTGGATAGAAACAGTTCTAGTTAA 2043 0.4298 MALCRTGPYPILESNGLGYSHINLSTKLVLPVPLRFAGPLSNVGKRKHKGVCSSSLRRAASASSMESHEQDTNTVSVCSEEETDHVIRFNMSDFKVLDHVSIGLGGRADEVVFEGKVKDSGSPLYNTRVILRQLYSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPGDSSLDSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEDSVRKVGEDTTGGPAISRQLRVIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFCEDGSNSGSMENMDRRKMMIAFDMRCVGFIMAKMVMGELMDPLIFAKFKSFFTQGNDPSCLRQFMLEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRRRLAHFIDLMEMLNPHPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPPVRVLVGDLHLTVAKESKLKANLSFVSDIGFSVMIGQDWPHDKAGKRGRLQVNSSFTLRAGRRLYLKQDNTSEKLSFRPSGNEEALAQKFASKKWRKITPFKEFPSSLPAAKFASGDDIDVTMNLDDPLNQNMDTVKNVLQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDRNSSS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03065 680 Gene3D Transferase(Phosphotransferase) domain 1 232 408 - -
Tsu08g03065 680 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED 69 673 - -
Tsu08g03065 680 SMART serkin_6 94 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03065 680 ProSiteProfiles Protein kinase domain profile. 94 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03065 680 Pfam PAP_fibrillin 441 667 IPR006843 -
Tsu08g03065 680 SUPERFAMILY Protein kinase-like (PK-like) 86 418 IPR011009 -
Tsu08g03065 680 PANTHER CELL DIVISION PROTEIN KINASE 69 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03065 Tsu-Chr8 47165253 47170367 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Tsu08g03065 PAP_fibrillin 3.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03065 - - ccaj:109796635 1142.49