Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03035 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCGGAGAGGAAATTTTCTGAAAGGGAATATATCGGTTCAAAGAAGTTTGCTCTCAAGGCTCAAAATTTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACTACTATTGATATTTACATATCTGCCGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTCTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAAAGACTAGAATATAACCAGAAGAGGAGTTTGAAAAACTTCCAACATACTACTCCCAACCGTGCTGGGCATCCATCCAATGTACCCACTTCAAATGGTTATTATCATTTTAAGAAGAATGCAACTTCAAACGCGAGGACTGGGAATAATAAACCTCGGGCTCCTTCGGCTTCTGTCCCTCCTCCACAGAAAAAAGCTGAAACCTTTTGGACTCTTTGTAATAAGTGCCGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGCCCTCCTCCCAATGTTTTTAAGCCATCAAATTTGTCCTCCCATCAACAGCACCAGAATTCTCGACGCCATGCTGGAAGTAATAATTCGAACCTTCAGTGGGGTTCCCAATCCAGAATGGCTGGTGTTGGTAGCACAGATGGATCCTCATCTGTTGCCGCTCAAGCTGCAAGTGTTGTGCAGAAAGCAAGTGAGAAAGTAAAGAGAGAAGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAGGGGTGATGGCTCTATGAAGAAAAGGAAGACAGATGATGGTCGCGTTAATGGTTTTCCAGGATATATGCCAAATCATATGGCTATGGGACATGGAGCAGCTGGTTTGGGCAGTTTCTCTGATCCAGGAAAGACTAACTTGGAGAAAGAAAGGACTTACGGTTTTTCAGGTCTTGCGGGCAAGCAGCATTACAGCATGCGAGAGTTGTCAATGTTTGAGTTACGAAACATGTTGGTGGATAAGGCAAGAACTGAAATTCGCAAGGAACTTCAAGAATTGAGGTTAAAGGCTGAAGCTAAGATGACCAACAAGAACAAAGAGGGTAAGAGACAAAAAAGCACATTTAATGGCAAAACAACTGGTTCAGAGAAGTGTGGAGAGTCCAATGTTAATGGCAATAAGCATTTGGATGTTGATTCTTTACCTGTCACATCTGATGATACGGTTAAGAAAAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACCTGGATAGAGCTGAAGGTTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGATGACGACGATGGCATGCCTAGATATTATGCTAGAATTCACAAGGTGATCTCCCTAAAGCCATTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTAACTGAATcattaaattcattttcacaCAAGGTTAGGTGGACAAAAGGCACCAGAGGAGTTGTCCGCATCTTTCCTGGTAAGGGGGAAGTCTGGGCACTTTATAGAAACTGGTCTGCAGATTGGAATGAACAAACTCCGGATGATGTGATACACAAGTATGACATGGTGGAAGTGCTTGATGATTTCAGTGAAGAGCAAGGTATATTAGTTACTCCCCTTGTTAAGTCTCCTGGCTTTAGGACAGTATTCCAAAGGCACAACGACCATAATGAGGTTAGGAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCTAGAAGCTCATAATGCTCCAATAGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGATCTCCTTCAGATAGAAACAGAAGCTAATGTGGCAGCAGGTAATGTTTAG 2130 0.4268 MMECNKDEAVRAKEIAERKFSEREYIGSKKFALKAQNLYPDLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKNFQHTTPNRAGHPSNVPTSNGYYHFKKNATSNARTGNNKPRAPSASVPPPQKKAETFWTLCNKCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSNLSSHQQHQNSRRHAGSNNSNLQWGSQSRMAGVGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKRGDGSMKKRKTDDGRVNGFPGYMPNHMAMGHGAAGLGSFSDPGKTNLEKERTYGFSGLAGKQHYSMRELSMFELRNMLVDKARTEIRKELQELRLKAEAKMTNKNKEGKRQKSTFNGKTTGSEKCGESNVNGNKHLDVDSLPVTSDDTVKKSQAYVTINVPDPDFHNFDLDRAEGSFAEDQVWAAYDDDDGMPRYYARIHKVISLKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSADWNEQTPDDVIHKYDMVEVLDDFSEEQGILVTPLVKSPGFRTVFQRHNDHNEVRRIPKEEMFRFSHQVPNHLLSGLEAHNAPIGCRELDPAATPLDLLQIETEANVAAGNV 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03035 709 MobiDBLite consensus disorder prediction 426 447 - -
Tsu08g03035 709 PANTHER HEAT SHOCK PROTEIN-LIKE 2 704 - -
Tsu08g03035 709 MobiDBLite consensus disorder prediction 233 276 - -
Tsu08g03035 709 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Tsu08g03035 709 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Tsu08g03035 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tsu08g03035 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tsu08g03035 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tsu08g03035 709 SMART dnaj_3 66 123 IPR001623 -
Tsu08g03035 709 CDD DnaJ 67 120 IPR001623 -
Tsu08g03035 709 PANTHER BNAC03G44070D PROTEIN 2 704 - -
Tsu08g03035 709 MobiDBLite consensus disorder prediction 136 185 - -
Tsu08g03035 709 Gene3D DnaJ domain 64 174 IPR036869 -
Tsu08g03035 709 MobiDBLite consensus disorder prediction 415 455 - -
Tsu08g03035 709 Pfam Domain of unknown function (DUF3444) 469 673 IPR024593 -
Tsu08g03035 709 Coils Coil 395 419 - -
Tsu08g03035 709 Pfam DnaJ domain 67 128 IPR001623 -
Tsu08g03035 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tsu08g03035 709 MobiDBLite consensus disorder prediction 234 276 - -
Tsu08g03035 709 MobiDBLite consensus disorder prediction 136 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03035 Tsu-Chr8 46853349 46855478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03035 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.051 3.06e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03035 - - mtr:MTR_3g091040 1260.74