Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03021 ATGGAAGATTCAAAGAACTTAATACAAGAGCTACTACAAGGAATGGAGTTGGCAAGACAACTTCGAATCTATCTCAATGTGTCTTCTTCTTCCAATGAAACACGTGAACTTTTGATAGAGAAAATCATATCCACATTTGAAAAAGCACTTGAAATGGTGAACCACAAAGGACATGTTAATGTTGGTGAATCATCACAACAAAAACAGAAACACACCTTAGGGACAGTTGCAATCCGAATGTTAGATTCACCACCTTTGAGCTCTAGTCCAAGAAGTGAAGACTCTGACAAAGATCACAATACTCCTAGAAAAAGAAACGTTGTACCAATTAGATGGACAAAACAAATTCGAGTTTCACCAGGAATGGCGGTCGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATTCTTGGAGCCATACATCCAAGAGGCTACTATAGATGCACTCATAGAAATGTTCAAGGTTGTTTGGCAACAAAACAAGTACAAAGATCCGATGAAGACCCAACAATCTTCGAAATCACTTACCGAGGAAACCATACATGCACAATGGCTTCATTAAATCCAATTGAAAACCAAGAAACAAATATTGTGAACACAAATCCTCAAAGCTTCGATCACGAGAAACCAGAACAACGTTTGAATGACCTACGAACAAGTCTAAGAGTCCAAACAGAGAACCTAGATTTCCTCAACCAATCATTTGCTCCTTTAAACCATTTACCTTCAACTTCCGAACTCAAATTTGAAAACCATGTACTTGAAAGTAGCTACGCCGAAAGCTTCAATTCTCCTTCGTATGTTTCACCTGCTAATTCCGGAATAGGTCATTTCTCGGTGTCTCCAAATCCAAGCGGGTTCCCAAATGTGGCAAGTGACATGATCCCTCTTGCTACTTCTGCTGCAAATACACCAACCACCACTTTAGATTTTCCATTTGACCAATTTCAATTTGATGGCCAGAACTTCACATTCGATCACACTCCATTTTTCCCTTGA 1017 0.3933 MEDSKNLIQELLQGMELARQLRIYLNVSSSSNETRELLIEKIISTFEKALEMVNHKGHVNVGESSQQKQKHTLGTVAIRMLDSPPLSSSPRSEDSDKDHNTPRKRNVVPIRWTKQIRVSPGMAVEGPLDDGYSWRKYGQKDILGAIHPRGYYRCTHRNVQGCLATKQVQRSDEDPTIFEITYRGNHTCTMASLNPIENQETNIVNTNPQSFDHEKPEQRLNDLRTSLRVQTENLDFLNQSFAPLNHLPSTSELKFENHVLESSYAESFNSPSYVSPANSGIGHFSVSPNPSGFPNVASDMIPLATSAANTPTTTLDFPFDQFQFDGQNFTFDHTPFFP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03021 338 MobiDBLite consensus disorder prediction 81 105 - -
Tsu08g03021 338 MobiDBLite consensus disorder prediction 91 105 - -
Tsu08g03021 338 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 3 334 - -
Tsu08g03021 338 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03021 338 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 334 IPR044810 GO:0003700
Tsu08g03021 338 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03021 338 Gene3D WRKY domain 118 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu08g03021 338 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu08g03021 338 SUPERFAMILY WRKY DNA-binding domain 126 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03021 Tsu-Chr8 45986999 45988666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03021 2 202 WRKY Transcription Factor Family AT5G24110 43.204 2.71e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu08g03021 WRKY 9.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03021 - - gmx:100812027 369.007