Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02989 ATGCGTAATCTTGTTCCGGGTTTTACCTTCATTCTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGCGAAGCTCTAACAGCTTAGCTAAATCATTGGGAACAATAGTATCAATTGCTGGTGCTTTAATTGCAACTTTATACAAGGGTGCTGCAATTCTGAAGGTACTGTCGCCTGCAAACTTATCTCAGCAGCCACTTTTCTCACAAGATTTAAATTGGATACTCGGAGGATTATTTCTTGCCGCTGATTGTGTGATGGCTTCATCATTTACTATAATACAGGCTTCTGTTCTTGAGAAATATCCCGCAGAGTTGATTTTTGTAttcttttattgtttctttgttGCCATTCTCTCTGGTGTGACCTGTTTGGTTGTCGAAAGAGACATTGGTGCTTGGAGCTTGGAACCCAAGCTAAGGTTGCTATCAGTTTTATACTCGGGAATCTTTGGTTCTGTGGTTCACGTTGGTGTTACTGCTTGGTGTTTGCGGCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCAATAGGAATTGTCATATCGGTGGCTATAGGCGTTCTCTTCCTTGGTGATGCATTCTATCTTGGAAGTTTGATTGGTGCTACTGTGATCGTTATTGGGTTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGCCAGAAGCTTGGAATCAAGCGGCAACCAGACCCCCCTTTTGAAGGAAAACATCAGTGAAGACATATGA 735 0.4054 MRNLVPGFTFILAVLFRMEQLDWRSSNSLAKSLGTIVSIAGALIATLYKGAAILKVLSPANLSQQPLFSQDLNWILGGLFLAADCVMASSFTIIQASVLEKYPAELIFVFFYCFFVAILSGVTCLVVERDIGAWSLEPKLRLLSVLYSGIFGSVVHVGVTAWCLRQTGPVFVSMFKPIGIVISVAIGVLFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEARSLESSGNQTPLLKENISEDI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02989 244 PANTHER WAT1-RELATED PROTEIN 1 223 IPR030184 GO:0016021|GO:0022857
Tsu08g02989 244 Pfam EamA-like transporter family 80 214 IPR000620 GO:0016020|GO:0016021
Tsu08g02989 244 PANTHER WAT1-RELATED PROTEIN 1 223 - -
Tsu08g02989 244 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02989 Tsu-Chr8 45497024 45499129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02989 1 243 Nodulin-like Gene Family AT5G40240 44.177 5.56e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02989 - - lja:Lj1g3v0913250.1 387.497