Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02982 ATGGGGAAGGTAACAGTTCCATTTATAGGGATGATTATTGCAGAGATTGTTCAAGTTGCTTTAATCATATTAAGCAAGCAAGTTATGTCACGGGGAATGACgagtttcattttcattttctactCAAATTCAATCGCTGCTCTTGTTCTTCTTCCATCTTCCTTCTTCATTCATAGATTTCAACGTCCTCCAATCACTTTTTCCACTCTTTCTGGTTTCTTCATACTTGGACTACTTGGTTATTTGGCGCAAGTTTTTGGATATGCTGGGATTAATTACAGCTCATCAACACTTGCTACTGCTATGCTTAATCTTGTTCCTGGATTTACCTTCATCCTTGCTGTTCTTTTTAGAATGGAACAGTTAGATTGGAAAAGCTCTAGCAGTTTAGCTAAATCATTGGGAACAATAGTATCTATTGCTGGTGCTTTTATTGCAACTTTATACAAGGGTGCTGCAATTCTGAAGGGACCGTCGCCTGCAAACTTATCTCAGCAGCCACTTTTCTCACAAGATTTTAATTGGATAATTGGAGGATTATTTCTTGCAGCTGATTGTGTGGTTGCTGCAGCATTTCTTATAGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGGGTTGATTGTTGTATTCTTTTACTGTTTCTTTGTGGCCATTCTATCTGGTCTGACCTGTTTGGCTGTGGAAAGAGATATCAGTGCTTGGAGCTTGGAACCCAAGCTAAGGTTGCTATCAGTTCTATACTCGGGAATCTTTGGTTCTGCAGTTCAAGTTGGTGTTACTACTTGGTGTTTGCACCAGACAGGACCAGTTTTTGTTTCCATGTTCAAACCCATAGGAATTGTCATATCGGTTGTTATAGGTGTTGTCTTCCTTGGCGATGCATTCTATCTTGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGGTTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGCCAGAAGCTTGCAATCAAGCGGCAACCAAACCCCCCTTTTGAAGGAAAACATCATTGAAGACATATGA 1038 0.3882 MGKVTVPFIGMIIAEIVQVALIILSKQVMSRGMTSFIFIFYSNSIAALVLLPSSFFIHRFQRPPITFSTLSGFFILGLLGYLAQVFGYAGINYSSSTLATAMLNLVPGFTFILAVLFRMEQLDWKSSSSLAKSLGTIVSIAGAFIATLYKGAAILKGPSPANLSQQPLFSQDFNWIIGGLFLAADCVVAAAFLIVQASILKKYPAGLIVVFFYCFFVAILSGLTCLAVERDISAWSLEPKLRLLSVLYSGIFGSAVQVGVTTWCLHQTGPVFVSMFKPIGIVISVVIGVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEARSLQSSGNQTPLLKENIIEDI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02982 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 149 - -
Tsu08g02982 345 PANTHER WAT1-RELATED PROTEIN 8 324 - -
Tsu08g02982 345 Pfam EamA-like transporter family 9 145 IPR000620 GO:0016020|GO:0016021
Tsu08g02982 345 Pfam EamA-like transporter family 179 315 IPR000620 GO:0016020|GO:0016021
Tsu08g02982 345 PANTHER WAT1-RELATED PROTEIN 8 324 IPR030184 GO:0016021|GO:0022857
Tsu08g02982 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02982 Tsu-Chr8 45467264 45471005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02982 6 344 Nodulin-like Gene Family AT5G40240 42.319 9.71e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02982 - - gmx:100804932 536.569