Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02981 ATGAGATTCTTGCTCCTTGGTTTTACAGGAATAACAATGACTCAAACACTTTTATTTTTGGGTCTAAGTTATAGTTCTCCAATACTTGTATGTGCAATGAGCCACTTGATCCCAACTTTTAATTTTCTCCTCAATATCATTAACAGgaaagtAGAGTTGAATTCGAAAAACTCTAGTATCCAAGTACAAATGATTGGTATAATGATATCATTAATGGGAGCAATAATAGCTGAATTCTTCAAAGGACCACTTATAAGACCTTCTTCTCACCACCTTAAACAAACTAAGCAACTTTTTATCTTTTCCTCAACAcctgaattttgggtttttggtGGCATTTTACTTGCTGCTGCTTCTTTTTCAGTTTCAATTACCAACTTTATTCAgAAAGAAACTGTTAAGCAATATCCAGAACCAATGAAGATGGTTTCTTATTATACCTTGCTTGGAATGATCCTAAGTGCAATAGTTTCATGCATATTTGAGAGTGATGTAAATGCTTGGAAGCTAAAGCATAACATGGAGCTCATTCTCATTGTTTTAACGGCGATATTTGGTGGTGTGATTCGTCCGAATATTCAAGTTTGGTTGAGTAGAATGAAGGGTCCACTTTATATGCCACAGTTCAAGCCATTTGGTATTGCTTTTGCCACCACATTTGGAGGTTGCTTTTTTCCTAACAGCCTTCATTATGGAAGTGTGATAGCAGCAAGTGTAATTGGAATGGGGTATTATACAATATTGTATGGAGAATTCAAAGGAGATGAAGATGAGAAAAACTATGATGAAAGCTCAGATTCTTTGGACAAGAAGATTCCTCTTTTGCAAGAAAAGATGGAAGAAgtGAGTTTATTGATTGATTGGTCTGTAACAGATGCAGTGTTTTTTCTGTTATTGCCTTTTGTTTGGGCGTCTGCCACTACTTTGGTTGGTGGTTTTTCTGCTAAATTTGCAGGTCCTTGCCCTTCAATTCGGGATGGAAGCGTTTATGCTTCTGATTACCTGAATCTAGTTTGTGGCGGGACGCGAGATCCTAAGAGACAATCGTCCatcaaagagaaaagaaaattcaGCAGGAGAAGGAAACGAAACATTCAGAAAGAGCTTACACTGCACTCCAGGTTCAATCTTGCAGTTCAGACAATGGTTCCGCCTAAATTGAAGAGAGATAGAAACAAAAATGAGCAAGATATGATTAGTGAATTACCTGATTGTGTTATCTTTctaattttatcttatttaaacTCTAAAATGGCTGTTCAAACGTGCATTTTATCAAAGAGATGGAAAGATATGTGGAAACAAATTACATCACTTACTTTGGATTCAACTCATTTCACTACTTCACGTAAATTTTGCATATTCTTTTCTAGGATTTTTGATCTCCGCAACAATTCAATTCCATTACACACTCTTGATTTTAATTGTGATCGCATTATTAATGAGtctcaaattttaaattctttcaCGACCTATGCTTTGTCACATAACTCCCATTTACAACATTTAGGAATATCGGTTGAAAGACACAATCTTGATATTCTATCTCATATGTCTTCATTTCAGACACTAACGTCACTTAAGCTTGCTATTTATCCAATAAATCCCACAACATTCTTTCCAAACTCTCTGAAATTACCTGCCTTGGTTAATTTAGAACTTACTTGTTTCATGTTTAAAGCTAACGAAGATGTTTGCTATGCTGAGCCTTTTTCAGGCTTCAGTAAGTTGAACAATTTGATAATCCGTTCTTGCACCGTATCGAATGAACATACCATTAAGATATCAAGTTTGTCGCTTGTCAAGTTCAGTATGCATGATAGCTTTTCCTACATTGAGCTATCTGCCCCATGTCTTAGTTCATTTACTTTTAGCGGTATTCCTGATCAGAATTTAAGTGGGAGTAGTCTTGATTCAATTAAAGAACTACATCTTGACATAAATACAATTTCTGAGAATTATTCGTATTATTCATCTGAGGATTATTTGCATTATTCACATGTTCTATTAAGGTGGCTTGGAGACCTTCCAAATTTAATATCATTGACCGTCTCTGCAAGTGCTCTTGAGATGCAGCACTTCAATGAAACTTATGCAGATGACAGTGCCACTGTCAGAATAACAATGACTCAAACACTTTTATTTTTGGGTCTAAGCTATAGTTCTCCGATACTTGTATGTGCAATGAGCCACTTGATCCCAACTTTTAAGTTTCTCCTTAATATCATTAACAGgaagGTAGAGTTGAATTTGAAAAACTGA 2262 0.3435 MRFLLLGFTGITMTQTLLFLGLSYSSPILVCAMSHLIPTFNFLLNIINRKVELNSKNSSIQVQMIGIMISLMGAIIAEFFKGPLIRPSSHHLKQTKQLFIFSSTPEFWVFGGILLAAASFSVSITNFIQKETVKQYPEPMKMVSYYTLLGMILSAIVSCIFESDVNAWKLKHNMELILIVLTAIFGGVIRPNIQVWLSRMKGPLYMPQFKPFGIAFATTFGGCFFPNSLHYGSVIAASVIGMGYYTILYGEFKGDEDEKNYDESSDSLDKKIPLLQEKMEEVSLLIDWSVTDAVFFLLLPFVWASATTLVGGFSAKFAGPCPSIRDGSVYASDYLNLVCGGTRDPKRQSSIKEKRKFSRRRKRNIQKELTLHSRFNLAVQTMVPPKLKRDRNKNEQDMISELPDCVIFLILSYLNSKMAVQTCILSKRWKDMWKQITSLTLDSTHFTTSRKFCIFFSRIFDLRNNSIPLHTLDFNCDRIINESQILNSFTTYALSHNSHLQHLGISVERHNLDILSHMSSFQTLTSLKLAIYPINPTTFFPNSLKLPALVNLELTCFMFKANEDVCYAEPFSGFSKLNNLIIRSCTVSNEHTIKISSLSLVKFSMHDSFSYIELSAPCLSSFTFSGIPDQNLSGSSLDSIKELHLDINTISENYSYYSSEDYLHYSHVLLRWLGDLPNLISLTVSASALEMQHFNETYADDSATVRITMTQTLLFLGLSYSSPILVCAMSHLIPTFKFLLNIINRKVELNLKN 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02981 753 PANTHER WAT1-RELATED PROTEIN 705 752 IPR030184 GO:0016021|GO:0022857
Tsu08g02981 753 PANTHER WAT1-RELATED PROTEIN 1 278 IPR030184 GO:0016021|GO:0022857
Tsu08g02981 753 Gene3D - 387 447 - -
Tsu08g02981 753 PANTHER WAT1-RELATED PROTEIN 705 752 - -
Tsu08g02981 753 PANTHER WAT1-RELATED PROTEIN 1 278 - -
Tsu08g02981 753 SUPERFAMILY F-box domain 388 443 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02981 Tsu-Chr8 45457652 45464369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02981 707 753 Nodulin-like Gene Family AT1G70260 53.191 3.89e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02981 - - lja:Lj1g3v0913340.1 461.07