Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02975 ATGAAAAAGTGTTGGTTTGTTGGGGTGTTGATTGTGGTGAGCTTGTTGGGTACAACAATTTGGGTTGAAGGGTACCCTATTGAGGATCTAGTTGTGAGACTACCTGGCCAACCTAAGGTTGAATTCAAGCAATATGCTGGCTATgttgatattgatttaaaacaTGGAAGGAGTCTTTTCTACTACTTTGTTGAGGCTGAACATGATCCTCATAAAAAACCTCTCACACTTTGGCTCAATGGaggcccGGGATGTTCGTCACTTGGAGGAGGTGCTTTTACTGAATTGGGTCCCTTTTATCCCACCGGTGATGCACGTGGTTTACGAAAAAATTCAAAGTCTTGGAATAGAGCTTCCAATCTCCTCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATATTCAAACACTACTTCCGATTATAACACCGGTGATACCACCACAGCCAATGATATGCTTTTGTTCTTTCTGAAATGGTATGAGAAGTTTCCTTCATACAAATCAAGGAAGTTGTTTCTTACCGGAGAAAGCTATGCAGGACACTACATTCCTCAATTAGCCAATGCTATTCTTGATTATAATGCTCATTCAACCAATTTCAAGTTCAATATAAAAGGACTTGCTATTGGAAATCCACTTCTGGATTTAGGTCGTGATACAAGGGCAACATACGAATACTTCTGGTCACACGGAATGATTTCTGATGAAATTGGCATTGCCATTATGAATGATTGTGATTTCGATGATTATACCGATCCAGGTTCTCATAACGTATCCAAATCATGCAACAAAGCCCTAAACGAGACTAATAAAATTGTGAGCGAATATATAGACAACTATGATGTGATTCTCGATGTTTGTTATCCAGCCATAGCTGTACAACAAATCAGATTAAGAAAAATGGCTACTAAAATAAGTTTAAGTGTAGATGTTTGTATGGATTATGAAAGTTTATTCTACCTTAACCTCCCAGAGGTTCAAAAGGCTCTCCATGCCAATCGTACCAATCTTCCATATCGATGGACCATGTGTAGTCGTATTTTAAATTACAGCGAATCAGATCCTAACATTAATATTCTCCCAATTCTTAAACGAATTATTCAAAACCATATTCCGGTATTGGTTTACAGTGGAGATCAAGATTCAGTTGTACCATTACTAGGTACTCGAACACTCATTCGTGAACTAGCCCATGACCTAAAATTTAAGATTACTGACCCATATAGAGTTTGGTTCCACAAAGGCCagGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGAGGTTTGCCACGGTAAGAGGAGCAGGTCACATGGTACCATATGGACAACCTTCTAGAGCATTACATTTATTTAGTTCATTCGTGAGtaacaagagacttccaaacACTACTCAACCTTCAATTGGATGA 1413 0.3786 MKKCWFVGVLIVVSLLGTTIWVEGYPIEDLVVRLPGQPKVEFKQYAGYVDIDLKHGRSLFYYFVEAEHDPHKKPLTLWLNGGPGCSSLGGGAFTELGPFYPTGDARGLRKNSKSWNRASNLLFVESPAGVGWSYSNTTSDYNTGDTTTANDMLLFFLKWYEKFPSYKSRKLFLTGESYAGHYIPQLANAILDYNAHSTNFKFNIKGLAIGNPLLDLGRDTRATYEYFWSHGMISDEIGIAIMNDCDFDDYTDPGSHNVSKSCNKALNETNKIVSEYIDNYDVILDVCYPAIAVQQIRLRKMATKISLSVDVCMDYESLFYLNLPEVQKALHANRTNLPYRWTMCSRILNYSESDPNINILPILKRIIQNHIPVLVYSGDQDSVVPLLGTRTLIRELAHDLKFKITDPYRVWFHKGQVGGWVTEYGNLLRFATVRGAGHMVPYGQPSRALHLFSSFVSNKRLPNTTQPSIG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02975 470 Gene3D - 359 457 - -
Tsu08g02975 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 465 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Tsu08g02975 470 Gene3D - 312 348 - -
Tsu08g02975 470 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Tsu08g02975 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Tsu08g02975 470 PANTHER CARBOXYPEPTIDASE 6 465 - -
Tsu08g02975 470 Pfam Serine carboxypeptidase 36 458 IPR001563 GO:0004185|GO:0006508
Tsu08g02975 470 SUPERFAMILY alpha/beta-Hydrolases 32 461 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02975 Tsu-Chr8 45398887 45402265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02975 319 461 Calmodulin-binding Proteins AT2G22960 29.371 1.44e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02975 K16297 - gmx:100815723 804.283