Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g02959 | ATGACTTTTGGTTTGGTTTACACGGTTTATGCTACTGCAGTACACCCAAAAAATGGTAGCCTAGGAACAATTGCTCCAATTGCTATTGGTTTCATTGTAGGAGCCAACATCTTGGCAGATGGGGCCTTTGATGGTGCTTCCATGAACCAGCAGTGTCTTTTGGGCCTGCTGTCGTTAGCTGGACATGGACCAATCACTGGGTCTATTGGGTTGAACCGTTGA | 222 | 0.464 | MTFGLVYTVYATAVHPKNGSLGTIAPIAIGFIVGANILADGAFDGASMNQQCLLGLLSLAGHGPITGSIGLNR | 73 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g02959 | 73 | Gene3D | Glycerol uptake facilitator protein. | 1 | 69 | IPR023271 | - | |
Tsu08g02959 | 73 | Pfam | Major intrinsic protein | 1 | 50 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tsu08g02959 | 73 | SUPERFAMILY | Aquaporin-like | 1 | 57 | IPR023271 | - | |
Tsu08g02959 | 73 | PANTHER | AQUAPORIN TIP1-1 | 1 | 52 | - | - | |
Tsu08g02959 | 73 | PANTHER | AQUAPORIN-8 | 1 | 52 | IPR034294 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g02959 | Tsu-Chr8 | 45105499 | 45105720 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g02959 | 1 | 55 | Major Intrinsic Protein MIP | AT3G26520 | 85.455 | 1.63e-24 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g02959 | K09873 | - | ath:AT3G26520 | 92.8189 |