Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02951 ATGTCTCAGAGAAGAGGTAGTGCATCTATGAACATGGCCACTGTGATGATTTCATTGCTCTGCCTTTTGGTTCTGGCTCAAAGTGCTAATGCAGCAACCTACACCGTTGGAGGACCTGGAGGATGGACCTTCAACACTGATACTTGGTCCAATGGGAAAAAGTTTAGAGCTGGTGATGTGCTAATCTTCAACTATGATTCAACGACGCACAATGTGGTTGCGGTAGACAAAAGTGGACACAGCAGCTGCAAGGCGACGGGAGGTGCTAAAGTGTTCAGTTCAGGGAAAGACCAAATCAGGCTAGCAAGAGGGCAGAATTACTTCATATGCAGTGTTCCTGGTCACTGCCAATCTGGGATGAAGGTTTCTATCAATGCAGTTTAG 384 0.4661 MSQRRGSASMNMATVMISLLCLLVLAQSANAATYTVGGPGGWTFNTDTWSNGKKFRAGDVLIFNYDSTTHNVVAVDKSGHSSCKATGGAKVFSSGKDQIRLARGQNYFICSVPGHCQSGMKVSINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02951 127 CDD Plantacyanin 32 126 IPR041844 -
Tsu08g02951 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Tsu08g02951 127 PANTHER BLUE COPPER PROTEIN 7 125 IPR039391 GO:0009055
Tsu08g02951 127 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
Tsu08g02951 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Tsu08g02951 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Tsu08g02951 127 Gene3D - 32 127 IPR008972 -
Tsu08g02951 127 PANTHER BASIC BLUE-LIKE PROTEIN 7 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02951 Tsu-Chr8 45012503 45013654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02951 1 127 Phytocyanin Superfamily AT1G17800 39.416 2.68e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02951 - - gmx:100788635 213.386