Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02936 ATGGTACCTCCAGGTCCCGGGCCGCCAACTCCCATTGGCGGTGCTCATTCTCTAATGAGAACAAATTCAGGAATGTTAGGAGCTCAAGGGACTCTCATGTCTTCACAGACATCTTACCCTTCGCTCATGTCTCCTCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATGCTGAATCAATCTTTCTCAAATGGAGTTCCAAGTCATCTCACTGGTCAAGGAAGTAGCCAGCGTGGAGGAATTGAAACTGGAGTTGAAACAGGTCAACTTTCCAGTGTTGGAAATGGGACGAGCTTCAATAATTCTCCATCGTCATTTGTACAATCAAATATGGTGAATGCAGGTTCTTCTGGTCAAATTCAGGGTCAGCAATTTTCGAACCCTTCTAGCAACCAACTATTGGCAGATCATCAGCATTCTCAACAGTTTGATCCTCAAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTTCTCTGAATacgcagcagcaacaacaatttCAATCAATGCGAGGAGGAATAGGTGGAATGGGATCAGTGAAGTTAGAGCCCCACGCAAACAATGACCAACTTGGACAGCTGCAGCTGCAATCAATGAGGAATCTTGCTCCAGTGAAATTGGATCAACAGCAAATTCAAACAATGAGAAATCTTGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAGCCGTTATTTATGcagcaacagcagcagcagcaacagtTCCTCCACATGTCGAGACAATCTTCTCAGGCTGCTGCTGCTCAGCTCAATCTTTTGAACCATCACAGACTTTTACAGTTACAACAACACCAGCAGCAACAACTCTTAAAGGCAATGCCTCAACAACGATCTCAATTACCACAACAATTTCAACAGCAGAATATGCCTGTGAGATCTCCTGTGAAACCTGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTGTCAGCAACAACATAGACCCGAGGATAACAACATTGAGTTTTGGAGGAAGTTTGTTGCTGAATATTTTGCTCCCAATGCGAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTAGCAGACAAACCACTGGAGTTTTCCCTCAGGATGCATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGACTATGCAAAAGCAATACAAGAAAGTGTTTTTGAACAACTTCGTGTTGTTCGTGACGGTCAACTTCGAATAGTTTTCTCTCCAGATCTGAAGATATGCTCTTGGGAATTTTGTGCCCGTCGGCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAACGGTTGCTCAGAAATACCAGTCTTTAACTCAAAATACAACACCGAATATATCTGCTCCAGAGTTACAAAACAATTGCAATATGTTTGTTACGTCAGCCCGTCAATTGGCTAAAGCCCTAGAAGTTCCATTAGTTAATGATTTAGGATATACTAAGAGATACATCCGCTGCCTACAGATATCAGAGGTGGTAAATAGCATGAAAGACTTGATAGCTCGCAGTAGAGAAACAGGGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAGTTAATTCATGTGGAGTTCGAAATCAAGCTCAACAGCATGAAGATCAATTAAAACAACAGCAGCAACAGCAAATGGGGGTCAATAACTCAAACGGCGATCAAAACCCAGTGCAAGCTGCTGCCATGCAAATTGGTTCCAGCAACGGTATGGTTAGTGTAAATAGTTCTGTCAACTCAGCGTCTGCATCAACAACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCTGTCAATTCTAGACAAAATTCAATGAACAATGCGAACAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTACTGTGCCACAGGCCCAACCAAGCTCATCCCCTTTTCAGTCACCGCCTACACCATCCTCATCTAATAACCCCCCACCAACACCTCTTTCTACTTTAACACCTCCCAATCAAATAAATACAACAAATTCAACAGCTAATTTTTCCTTGCAACAACATCAATATCAACCTTCTCTTTCTGGCGATGCCGACCCAAGTGATGCTCAAAACTCAGTCCAAAAAATCATACATGAGATGATGATGTCTTCCCAGATGAATGGTACAGGTGGAATGACAGGTGTTGGTTCTCTAGGAAATGATTTGAAGAATTTAAATGGCATTTTGCCAATGAGTGCAAATACAGGGTTCAACAATAGTAACGGCACACTGAACAATAATACAGGTGTTGGTAGTTATGGAACAATGGGGTTCGGTCAATCCACTATGCCTAACGGAATCAGAGCTGCTATGGTAAATCATTCAGTCATGAATGGAAGGGGAGGAATGTCATCTATTGCTCGGGATCAATCTATGAATCATCAACAAGATCTTTCAAACCAACTACTTAGTGGTCTAGGAGCAGTAAATGGTTTTAGTAATCTTCAATTTGATTGA 2664 0.4182 MVPPGPGPPTPIGGAHSLMRTNSGMLGAQGTLMSSQTSYPSLMSPRTQFNNMNILGNMSNITSMLNQSFSNGVPSHLTGQGSSQRGGIETGVETGQLSSVGNGTSFNNSPSSFVQSNMVNAGSSGQIQGQQFSNPSSNQLLADHQHSQQFDPQNFQHSQQSMQQFSSLNTQQQQQFQSMRGGIGGMGSVKLEPHANNDQLGQLQLQSMRNLAPVKLDQQQIQTMRNLAPVKMEPQHCDQPLFMQQQQQQQQFLHMSRQSSQAAAAQLNLLNHHRLLQLQQHQQQQLLKAMPQQRSQLPQQFQQQNMPVRSPVKPAYEPGMCARRLTYYMCQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDAWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGTVAQKYQSLTQNTTPNISAPELQNNCNMFVTSARQLAKALEVPLVNDLGYTKRYIRCLQISEVVNSMKDLIARSRETGTGPMESLAKFPRRTVNSCGVRNQAQQHEDQLKQQQQQQMGVNNSNGDQNPVQAAAMQIGSSNGMVSVNSSVNSASASTTTSTIVGLLHQNSVNSRQNSMNNANSPYGGSSVQIPSPGSSSTVPQAQPSSSPFQSPPTPSSSNNPPPTPLSTLTPPNQINTTNSTANFSLQQHQYQPSLSGDADPSDAQNSVQKIIHEMMMSSQMNGTGGMTGVGSLGNDLKNLNGILPMSANTGFNNSNGTLNNNTGVGSYGTMGFGQSTMPNGIRAAMVNHSVMNGRGGMSSIARDQSMNHQQDLSNQLLSGLGAVNGFSNLQFD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02936 887 MobiDBLite consensus disorder prediction 700 723 - -
Tsu08g02936 887 MobiDBLite consensus disorder prediction 74 176 - -
Tsu08g02936 887 MobiDBLite consensus disorder prediction 665 733 - -
Tsu08g02936 887 MobiDBLite consensus disorder prediction 1 22 - -
Tsu08g02936 887 Coils Coil 595 615 - -
Tsu08g02936 887 MobiDBLite consensus disorder prediction 591 620 - -
Tsu08g02936 887 MobiDBLite consensus disorder prediction 665 699 - -
Tsu08g02936 887 PANTHER LIM DOMAIN-BINDING PROTEIN 1 887 IPR029005 -
Tsu08g02936 887 Pfam LIM-domain binding protein 324 578 IPR029005 -
Tsu08g02936 887 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02936 Tsu-Chr8 44878478 44884946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02936 8 887 C2H2 Transcription Factor Family AT1G43850 56.494 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02936 - - gmx:100787573 1193.72