Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02825 ATGGGGTTCAAAACAAGTATCAatcaatttctattttctattttgatCCTCCTAATAATCCCAACAACACTAATAGCTGCCGAATGCACATGTGATAAGGAAGATGAAGATAGAAACAAAGCCAAAGCCCTAGTTTATAAACTAGCAGCTTTGGTTTCGATACTAGTTGCGAGTGCAATTGGTGTTTTCATCCCTCTTATTGGCAAAGTGATACCGGCATTAAGCcctgaaaaaaatatattctttatcATCAAAGCCTTTGCGGCCGGTGTGATATTATCTACCGGTTTCATTCATGTTCTTCCTGATGCTTTTGAGAATCTTACTTCGCCTTGTTTAAATCAACATTCTTGGGGTGATTTTCCGTTTACCGGTTTTGTGGCTATGTGTACCGCTATGGGGACTCTTATGGTTGAAACTTACGCCACCGCTTATTTTCAGAATCAATATTCTAAAAAGgcatcatcatcaacacatgTGGCGGCGACCTCCGACGTGGAGAAGGAAGCTGGAGATCAGCATCATGGACATGTAGATGTTCATGTTCATACTCATGCATCACATGGTCATGCACATGGCCGTGTTTCTTCTTCCGATCCATCATTAGAACTTCTACGTCATAGAGTCATATCAGAGGtaGTGTTGGAGATGGGAATTATTGTTCACTCTATTATTATTGGAATTTCTCTTGGTGCTTCAGACAGTCCAAAAACCATAAGGCCACTCGTAGCTGCATTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAATCTATCAATTACAATAAGGGGATTATCCTTTGCTTTGACAACTCCAATTGGTATTGGAATTGGTTTAGCAATAAGTAGTGTTTATGATGAGAACAGTCCAACTGCACTTATTGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATTTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTTGTAGGCTTAGATTAGGATGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCTAAATGGGCTTAA 1095 0.3753 MGFKTSINQFLFSILILLIIPTTLIAAECTCDKEDEDRNKAKALVYKLAALVSILVASAIGVFIPLIGKVIPALSPEKNIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNQHSWGDFPFTGFVAMCTAMGTLMVETYATAYFQNQYSKKASSSTHVAATSDVEKEAGDQHHGHVDVHVHTHASHGHAHGRVSSSDPSLELLRHRVISEVVLEMGIIVHSIIIGISLGASDSPKTIRPLVAALTFHQFFEGMGLGSCITQANFKNLSITIRGLSFALTTPIGIGIGLAISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSCRLRLGCNLSLLLGAGCMSLIAKWA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02825 364 TIGRFAM zip: ZIP zinc/iron transport family 30 364 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tsu08g02825 364 PANTHER ZINC/IRON TRANSPORTER 21 364 - -
Tsu08g02825 364 PANTHER ZINC TRANSPORTER 1 21 364 - -
Tsu08g02825 364 Pfam ZIP Zinc transporter 46 361 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02825 Tsu-Chr8 43461872 43463164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02825 11 364 Inorganic Solute Cotransporters AT3G12750 54.318 6.32e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02825 K14709 - gmx:547695 496.893