Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02814 ATGACCTTTGCCTCAATAACAGTAATCACCGATAGTTTTGTGCTtcttgataacttcacttttgcAAACTATACTAGCTCTCACTTGATGAAGGAGTATTTAATCAGTGTTACATCTTATGAGTTGTTTATCGCATTCATCCCTCGCCACAATTCACTTGTTTTTGTTAATGCCATCGAAGTTGTCTCTATGCCAGATGTGTTATTTCCTAACAGTCTAAATCCATCCACTCCTTTCACAGAATTCACCCTTGAAACGGTGTATCGATTGAATGTGGGAGGCGCAGATATTAGTGCACAAAATGACACACTTGGTAGGAATTGGGAGAGTGATGAAACTTACTTTCAGTCCACCACCACTGGTATGAATATTTCAACAAACATTTCTGCTATTAAGCATCCTGATTTCTTAGAATTTACAGCACCACCAATGGTTTATATTACTGCTAAATCCTTGGGAAGTGTCTCAGGGGGTTACAAATTAAGCTGGGAATTTCGTGTAAGCCCAAATTTTTTGTACTTTGTTCGTGTGCATTTTTGTGACATGATAAGCAACTCTACTAACTCTATGGTTTTGGATCTATTTATGAATGGATACATTGCTTTTCAAAGTCTCGACCTGTTAAGAGTTTCTGGTGACCTTGTTGAGCCGTATTACAAAGACTTTGTGTTCAAAGTCACAGGGGAAACACTCACAGTAAGCGTTGGTCCTGCTACAATATCTAGTATACCAAATGCAACGATGAATGGGATAGAGATAATGAAGTTCATTAACAAAGTTAATGCgtctaaaaaagaaaataaagttgaCAATGTTTTAACAAAAACTTCAGAACTAAGCAAGACTTCAAAATTGGTCATTATAATTGGATGTGGTGTCTCTGTTGTAACATTTCTAGCATTTCTTGGACTATCATTTTGTTACCTAAAATCCTGCAGGTTGAAGAAAAGTTCAGTAAATGCTTACGAATTTCTGAGGCATTTTACTTTGCATGAGATGCAACACGCAACAAATGGTTTTGATGTTGAGTTGCTTATTGGAGTAGGAGGATTTGGAAAGGTGTATAAAGGAACACTTGAAAATGGGAAAATAGTAGCCATCAAAGTAGCCAATCCTGAATCTCGACAAGGTCTCGATGAATTCCATAACGAGATTGAATTGTTGTATGGTCTTCATCATCAAAACCTTGTATCTCTTGTAGGTTGTTGTAATGAAGACTCAGAACTGATTCTGGTATACAACTACATGGCAAATGGATCTCTCAGTGGTCATCTATATGGGAGGGACTTTGTTCCTCTGTCATGGAAGCAACGCCTTGTGATATGTTTAGGGGCTGCAAAGGGACTTTTATATCTTCACACTGGAGCTAAACAGAGCATAATTCACCGTGATGTAAAGACAACAAACATTCTCTTGGATGAAAATCTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAAAAGGGTCCTCTTCTTGATAAAAGCCATGTTACAACCAATGTAAAGGGTAGTTTTGGCTATGTTGATCCAGAATATTTTTGGACTAAGTATCTCACTAAGAAATCGGATGTATACTCGTTTGGGGTGGTCTTGATTGAAGTTATATGTGGGAAGCCTGCTTTAGATGATACCCATACAACACAGGAGATGAATTTGGCACTGTGGGCATTAAGCTGCAATAAAAAAGGTACTTTCAATGAAATGGTAGACCCATATTTGATTGGAAAAGTTAATATGGATTCTCTAAACAAGGTTTTAGAGTTGGCATGGAAGTGCCTGGAGGAGCGTCGGGTTAACAGACCACCAATGGGGTATGTATTATGTCAACTAGAAGAGGCTCTCCATCTCGAGTTGGCTTCACATGTTTTGAATGACAATGATAATGGGGATTCTTCTACATATTCTAGTGTAGGAAATGAATTTACAGAGGATATAGAAGCTGTTGTTTGA 1950 0.3718 MTFASITVITDSFVLLDNFTFANYTSSHLMKEYLISVTSYELFIAFIPRHNSLVFVNAIEVVSMPDVLFPNSLNPSTPFTEFTLETVYRLNVGGADISAQNDTLGRNWESDETYFQSTTTGMNISTNISAIKHPDFLEFTAPPMVYITAKSLGSVSGGYKLSWEFRVSPNFLYFVRVHFCDMISNSTNSMVLDLFMNGYIAFQSLDLLRVSGDLVEPYYKDFVFKVTGETLTVSVGPATISSIPNATMNGIEIMKFINKVNASKKENKVDNVLTKTSELSKTSKLVIIIGCGVSVVTFLAFLGLSFCYLKSCRLKKSSVNAYEFLRHFTLHEMQHATNGFDVELLIGVGGFGKVYKGTLENGKIVAIKVANPESRQGLDEFHNEIELLYGLHHQNLVSLVGCCNEDSELILVYNYMANGSLSGHLYGRDFVPLSWKQRLVICLGAAKGLLYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYVDPEYFWTKYLTKKSDVYSFGVVLIEVICGKPALDDTHTTQEMNLALWALSCNKKGTFNEMVDPYLIGKVNMDSLNKVLELAWKCLEERRVNRPPMGYVLCQLEEALHLELASHVLNDNDNGDSSTYSSVGNEFTEDIEAVV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02814 649 Pfam Malectin-like domain 23 255 IPR024788 -
Tsu08g02814 649 PANTHER OS03G0759600 PROTEIN 6 301 - -
Tsu08g02814 649 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Tsu08g02814 649 SUPERFAMILY Protein kinase-like (PK-like) 323 612 IPR011009 -
Tsu08g02814 649 PANTHER OS07G0166700 PROTEIN 6 301 IPR045272 GO:0004714|GO:0006468
Tsu08g02814 649 Gene3D Transferase(Phosphotransferase) domain 1 416 633 - -
Tsu08g02814 649 PANTHER OS07G0166700 PROTEIN 317 629 IPR045272 GO:0004714|GO:0006468
Tsu08g02814 649 Gene3D - 82 257 - -
Tsu08g02814 649 CDD STKc_IRAK 346 612 - -
Tsu08g02814 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Tsu08g02814 649 SMART serkin_6 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02814 649 PANTHER OS03G0759600 PROTEIN 317 629 - -
Tsu08g02814 649 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02814 649 Pfam Protein tyrosine and serine/threonine kinase 345 548 IPR001245 GO:0004672|GO:0006468
Tsu08g02814 649 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02814 Tsu-Chr8 43338436 43340385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02814 4 619 Receptor kinase-like Gene Family AT4G39110 42.707 1.41e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu08g02814 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02814 - - mtr:MTR_8g467150 1017.68