Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02807 ATGGAGCTTGGTTTGGATAGTAGTAAATTACAATTACAACCACAAAACTTGAAGCAAGAACAAAAGCTGCTACAACAACAGGAGCAGCATTTTCATGTATTGGCAGTTGATGATAGTGTCATTGATAGGAAGCTTCTAGAGAGACTTTTTAGAGGTTCGTCATGCAAAGTTACTTGTGTGGACTCTGGAGATAAGGCTTTGAAATATCTTGGACTGAATAATATTGATGAACTTGATAACaatttttcttcaacaaaatctCTATTAGAATCATCATCTCACGATTCTCCTCCTCTTCCTAAACCGTTGCAGCTGAAAGAGGGAATTAGCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAAAGAGTCAAGGGATCTTCTTGGAAAGATGTTCCTGTTGTGATCATGTCATCAGAAAATGTACCTTCCAGAATTAGCAtGTGCTTGGAAGAAGGTGCAGAAGAATTTCTATTGAAACCTCTTCAATTATCAGATTTACAGAAGCTTCAGCCATACTTTCTTAAATCTCTAGATAATTCTTCTGATGATCAAGAATCTGCAAACAGTTCCACTTCTACCACAGATTTTGACGACGACGATGATGTTGATCTCGTCGAcaacaatattaataataacagtATAATTAGCAAAAGGAAGGCTATGTCTCCTGAACCTGCAGAGAGATCAAGGACCAAAATGAAAGGGTTGGCGCGCCAAATTAAGAAATCTTGcatattattaattagtttaattatGATTATGCTTCTAATTATGCTTTTCACCTAA 816 0.3493 MELGLDSSKLQLQPQNLKQEQKLLQQQEQHFHVLAVDDSVIDRKLLERLFRGSSCKVTCVDSGDKALKYLGLNNIDELDNNFSSTKSLLESSSHDSPPLPKPLQLKEGISKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLQKLQPYFLKSLDNSSDDQESANSSTSTTDFDDDDDVDLVDNNINNNSIISKRKAMSPEPAERSRTKMKGLARQIKKSCILLISLIMIMLLIMLFT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02807 271 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 14 247 - -
Tsu08g02807 271 MobiDBLite consensus disorder prediction 188 212 - -
Tsu08g02807 271 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 247 IPR045279 GO:0009736
Tsu08g02807 271 SMART REC_2 31 180 IPR001789 GO:0000160
Tsu08g02807 271 MobiDBLite consensus disorder prediction 188 203 - -
Tsu08g02807 271 CDD REC_typeA_ARR 33 179 - -
Tsu08g02807 271 ProSiteProfiles Response regulatory domain profile. 32 184 IPR001789 GO:0000160
Tsu08g02807 271 SUPERFAMILY CheY-like 31 179 IPR011006 -
Tsu08g02807 271 Pfam Response regulator receiver domain 111 178 IPR001789 GO:0000160
Tsu08g02807 271 Gene3D - 32 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02807 Tsu-Chr8 43181829 43186987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02807 28 186 Response Regulator Gene Family AT3G57040 56.250 1.44e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu08g02807 Response_reg 1.3e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02807 K14492 - gmx:100801334 291.582