Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02798 ATGGCTAATCAAATGTCAAACTCTTTCTGTTTCTTTGCCATCTTGGTTTTATTTGTTGCAGCAAATTGTGCTTCACATTGTAATTCCTATGCAAGAGGTGCTCGTGTTTTAGGATCATCATGTTCATTCAACAACTTATGCACTTGTACTTTTGATCGAGCACCGCCAGGATCGGAACAACCTGCCTGTGATGTTGGGATGGGACTTTGCACTAGGGACTGTCAAGATGATTGTTGCAACAAGAAGTGTCTTAGCAGGTTTAGCAAAACTGGTCATGGGAGTTGCGTGGATACCTTTAACATGATTATATGTCTTTGTGCCTATAACCGTTAA 333 0.4084 MANQMSNSFCFFAILVLFVAANCASHCNSYARGARVLGSSCSFNNLCTCTFDRAPPGSEQPACDVGMGLCTRDCQDDCCNKKCLSRFSKTGHGSCVDTFNMIICLCAYNR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02798 110 PANTHER DEFENSIN-LIKE PROTEIN 183 21 109 IPR039641 -
Tsu08g02798 110 PANTHER DEFENSIN-LIKE PROTEIN 183 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02798 Tsu-Chr8 42951710 42952226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02798 46 108 Plant Defensins Gene Families AT5G38330 36.508 1.67e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02798 - K16669 mtr:MTR_2g037250 145.591