Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02768 ATGGCTTCATGTGACTCCGATCCAATCCTCACcgATCTCAAACACTATTGGGGTTGGTGCTCCATTGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACCGGTGGTATTGATGGGTTTGAAGCCACTGCTGTCGATTCTGATGAGAAGATCGATACCGCAAGTGAATCAGTGACTTCTTATGCTCGCCACCTTGAGAATAGACACGATATGCTTCTGGGGTTGCTGTTCGACCGTGGGACATATAAGAAACTCTATAGCTATAGACATCTTATAAATGGGTTTGCGGTTCATATTTCCCCGGAACAGGTAGAAACACTTCGACATGCTCCTGGTGTGAAATCTGTTGAGAGGGATTGGAAAGTGAAGAGACTTACAACACATACTCCACAATTTTTGGGACTTCCAACCAGTGTTTGGCCAACTGGAGGAGGCTGTGATAGGGCTGGAGAGGACATTGTGATTGGATTTGTGGATTCTGGAATATATCCTCACCACCCGAGTTTTTCTACTCATAATACTGAACCATATGGACCGCTTGCAAAATATAGAGGAAAATGTGAAGTTGATCCTAAGACTAAAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTTCTGGAACGTTTAATCCTTCAATTGATTTTGCATCTCCTCTGGATGGAGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATACCTGTAAGGTTGTATGGACATGAATTCGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCGCTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGAGTAGATATACTCAGCCTTTCAGTTGGACCAAATGGTCCACCAGCAGCTACCAAAACCACGTTTCTGAATCCTTTTGATGCTACACTTCTTGGGGCTGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCGGGAAACGGTGGCCCTTTTCCCAAGTCATTAGTTTCATATAGTCCGTGGATTGTATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGACCCTTGGAAATGGGAATATCTTAGCAGGACTTGGGCTGTCACCTTCTACACATTTAAACAATACATACACATTGGTTGCTGCAAATGACGTGCTGCTAGACTCTTCAGTTATGAAGTACAGCCCAACAGATTGCCAGAGACCGGAACTTTTAAACAAGAACTTGATAAAGGGGAAAATTCTTCTCTGTGGCTATTCTTTCAACTTTGTTGTTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTCTGTGTAGAAAATGTTTCTCCTGGAACAAAATTTGATCCTGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTTAGCAAATCAAAGGCTCTAATAGATTATTATAATATCTCCACACCAAGAGATTGGACTGGAAGAGTGAAGAGTTTCAAAGGTATAGGTAAAATTGGGGACGGTTTGATGCCTATTCTCCATAAATCCGCACCACAGGTGGCATTATTCTCTGCTAGAGGGCCAAATATAAAGGATTTCAGCTTCCAAGAAGCAGATCTTCTCAAACCAGATATATTAGCTCCAGGTTCATTGATTTGGGGTGCTTGGTCTCTGAACGGAACTGATGAGCCAAATTATGATGGAGAAGGATTTGCTATGGTATCTGGAACTAGCATGGCTGCACCGCACATTGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACGTTGGAGCCCTGCTGCCATTAAATCAGCCTTGCTTACAACATCAACAACTCTAGACAGAGCAGGAAACCCAATTCTAGCTCAGCAATATTCTGAAACAGAAGCTATGAAGCTGGTCAGAGCCACTCCTTTCGATTATGGAAATGGGCACGTGAATCCAAAATCAGCCTTGGACCCTGGGCTCATCTTTGACGCAGGATACAGAGACTATTTAGGGTTCTTGTGCACAACGCCTGGCATTGATTTTCATGAGATAAAGAAGTACACAAACTCACCATGTAACAGAACCATGGGTCACCCATATAATTTAAACTCTCCATCAATTACAGTTTCACATCTTGTGAGAACTCAAGTTGTAACTCGCACAGTCACAAACGTTGCTAAGCAAGAAACCTACGTGATGACGGCTAGAATGCAACCAGCAGTTGCCATTGAAGTCAACCCTCCAGCAATGACGATCAAAGCTGGTGCATCACGCAAGTTTACTGTAACGCTTACCGTTCGATCAGTGACAGGAACATATAGTTTCGGAGAAGTTTTAATGAAAGGAAGCAGAGGACACAAAGTGAGGATTCCAGTTCTGGCCAATGGATATTCAAGATAG 2454 0.4319 MASCDSDPILTDLKHYWGWCSIEVYIVTVEGEPIISYTGGIDGFEATAVDSDEKIDTASESVTSYARHLENRHDMLLGLLFDRGTYKKLYSYRHLINGFAVHISPEQVETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTSVWPTGGGCDRAGEDIVIGFVDSGIYPHHPSFSTHNTEPYGPLAKYRGKCEVDPKTKRSFCNGKIIGAQHFAQAAIASGTFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRLYGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNGPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIVSVAAAIDDRRYKNHLTLGNGNILAGLGLSPSTHLNNTYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGKILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSKSKALIDYYNISTPRDWTGRVKSFKGIGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYDGEGFAMVSGTSMAAPHIAGIAALIKQKHPRWSPAAIKSALLTTSTTLDRAGNPILAQQYSETEAMKLVRATPFDYGNGHVNPKSALDPGLIFDAGYRDYLGFLCTTPGIDFHEIKKYTNSPCNRTMGHPYNLNSPSITVSHLVRTQVVTRTVTNVAKQETYVMTARMQPAVAIEVNPPAMTIKAGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02768 817 Pfam Peptidase inhibitor I9 24 127 IPR010259 -
Tsu08g02768 817 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 816 IPR045051 -
Tsu08g02768 817 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Tsu08g02768 817 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Tsu08g02768 817 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Tsu08g02768 817 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Tsu08g02768 817 Pfam Fibronectin type-III domain 719 811 IPR041469 -
Tsu08g02768 817 Gene3D - 369 534 - -
Tsu08g02768 817 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Tsu08g02768 817 CDD PA_subtilisin_like 376 514 - -
Tsu08g02768 817 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Tsu08g02768 817 Pfam Subtilase family 154 639 IPR000209 GO:0006508|GO:0008236
Tsu08g02768 817 CDD Peptidases_S8_3 130 633 IPR034197 -
Tsu08g02768 817 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 128 IPR037045 -
Tsu08g02768 817 PANTHER CUCUMISIN-RELATED 15 816 - -
Tsu08g02768 817 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Tsu08g02768 817 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Tsu08g02768 817 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Tsu08g02768 817 Gene3D - 691 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02768 Tsu-Chr8 42512200 42521908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02768 23 817 Subtilisin-like Serine Gene Family AT4G30020 79.925 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02768 - - gmx:100784999 1442.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04576 04 53339606 53345375 Tsu08g02768 08 42512200 42521908 PCT