Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02758 ATGGCTGCAAGATTGTATCCAATACTAAGAGGAACCACTAAAGGCATGTTTGCTGCAGTTAATCTTCCTAATGAGATCATTGGAGAGATTGATCCTTTTTTTATCGCGGAACATTTTCATGAACTGGACACCCGATGGGACTTATATGATGGAGAGGGTATTCCTCACCAAATCGAATTCAACAAAGATCTACACAATCCACGAATTATTGTTGGTTGGCCTAGACTTAGACACTATTATCGTTGGACTGGAAATCAGAAACTTCAATTTTTCTACTACGGTGAAAACTCTTTTCTAATGATTGTTTGTGTAAACAATTCAAACGTTAATCCATCATCATTTCCTCAATATCATAGTTTGAGTACAAAGACAGAGGATTATCGTTCATTCCAAATGTTAATGACCCATTCAAGTGTTAATTCTTCTAAACTGgATTTCATGAAAGGTGAAAATGGATGTGAAGGATACAATGTAGAAGGTTCTTTCGGCAAAGAGGTAAGTAACCATGTAGGGATTTCTGTAAATGGGTTAGAAGATATGGGTGGTGTTGATTTTAAGATGTTAACTGAAGATGATATGAAGAAGTACCATTTCCCAAATCTTGAGGTGGCTTTTACATTCTATAATTGGTATGCTAGAATGAATGGATTTTCTGCCCGCAAAAGCAAGTTTAGAAGAAACAAGTATAAAGAAGTTGTGCAACAGAATTTTGTTTGCTACAGACAAGGGTTTAGAGAAGATAGGTTTCAGAATAATAAAATTCGTATACGTGAAGCTAGAGCAGACACACGTTGCGGATGCGATATGTGTGGAGGTGATCAGCTTGGTGCGCGTTTTGGATCGGTGGCGATCAGAGTGGTTTACAAAGGATGCGACTAA 879 0.3743 MAARLYPILRGTTKGMFAAVNLPNEIIGEIDPFFIAEHFHELDTRWDLYDGEGIPHQIEFNKDLHNPRIIVGWPRLRHYYRWTGNQKLQFFYYGENSFLMIVCVNNSNVNPSSFPQYHSLSTKTEDYRSFQMLMTHSSVNSSKLDFMKGENGCEGYNVEGSFGKEVSNHVGISVNGLEDMGGVDFKMLTEDDMKKYHFPNLEVAFTFYNWYARMNGFSARKSKFRRNKYKEVVQQNFVCYRQGFREDRFQNNKIRIREARADTRCGCDMCGGDQLGARFGSVAIRVVYKGCD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02758 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 172 269 - -
Tsu08g02758 292 Pfam FAR1 DNA-binding domain 206 268 IPR004330 -
Tsu08g02758 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 172 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02758 Tsu-Chr8 42234416 42238330 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu08g02758 FAR1 5.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02758 - - mtr:MTR_1g052260 183.726