Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02737 ATGAACAGTTCATTATTCTCTTTTTTGAAGGCAAAAGGAGTGTATGGTGCTTATCTCGTTGCTTGCCATGACAAAGAGAACGAAGAATTTCAAAGTATCGTCAAGTTAGCAACTGGATTCACAGAAAAGGAGCTTGATGAACGTTCTGCTATCCTTCGCTCTAAAATTGTAGTACTAGAGTTCTACTCGGGGGTTGTTATTGTAGCTAGGGAGGCATTACTAAGTGGTGTACAATCATTATCAATATCATTAGATTGGAAGAAAGATGAAAGTAAACAAACTGATTTCAAGGATGCAGTTGAAGTCTGTTTACCGTTGATAAATCCCAAAAACTGCTTTCTAAATATAGAAATTGCGAGGTCACCTTCGAGCAACAAGGTTTCGGCCGACAACCTACTTTTCGATCCTGAGATTGAACGTACGGCCAGAAGAAACAACAGTAAAACACGAAGAAAGAAACAACTAGCCAAACAAAGAAAGCAACAAGAAGGATCTTCTATCTCTATTTCTTCTACATCTTCAGGAGCTGAGGAAATTATGGCAAATATCCCAGAACCACAACCGGATGGTAATGGTGGTGCCATGCCATGCCACAACAGTCCAAGAAGGTTAGCTCATCTTGCCAGACCACAAAGAGGAGCAAGACAACCGGAGATGAAGACTGGACTTCTCCAACTTTTAAGAAGAAGCAGTATTCATGAGAATGTTTCCACATTCATTGATTGGTCAAGAAAAGGATTGGTATCTAGACCAACCAACACCTGTCATGACAAATTGGAATGTATCCCGCATCATAAGTTCATGGAGGCCAAAACATCTATTGCTGTATTTTCTCAAGGAGCAAATGAAACTCTTAATGAAGCTTGGGAGCGGTACAAGTCAATGTTACGGAAGTGTCCCAATCATGGGTTTGATGAACTCACTCAAATTCATATCTTCCGCAATGGTCTTCTTCAACAAATCAAGCTTCTATTAGATGCTACAGCAGGTGGTTCCCTTTTATCATTAAGTGCTGCAGATGCCACTgcaattattgaaaaaatggcACTTAGTGATCGTCAGGGAGATTACAACAGAAATCCTGTACATAGGAAAGCTGGAATTCTTGAACTCGATACTTCAGATGCGGTCTTAGCTCAAAACAAGCTGCTCACCAACACAGTTGATCAGTTGTCGAAGCAAATGGCAAGAATGATTAGTTTACAAGAAGAAACGGGAAAAGCCAAACAAGTTGCATTCTGCGAATTGTGCACTGGTGATCATGCAACTGGACATTGTCCTCCGGCAAAGGAAGAGGTGAACTTCATGGGTAATCAACCAAGGCAAAATCAGTATCAGAACAACGCTGGCtatcaaagaaacaacaatGCAAATTATGGCCAGGGATGGAGACAGGATGCTGGTTCGTCAAATAGACAAAGACAGTATGAAAGTTTCAACCAACCACCTCCAACAAATAACCAAAATTCAAGTTTAGAGGAGACAATGAAGAAATTCATGGAACAGCAACATAAGTTTCAGCAAGACGTTCAAATATACCAAAGAGGCAACAATGCGGTGTTGAGAAACTTAGAGACGCAGATTGGCCAAATAGCAAGACAAGTGGCCAGCAATAATAATCAACCAGGATCTTTTGCTGCTAACACGGAGCCGAATCCAAAGGAACAATGCAAGTCAATAATGACAAGGAGCGGCAAAGAGATTGGTGTAGGCATCGGCGATAATCTCCGAACTGAAAAAGCTGTTGTGGATgcaagagaaaaagaagaagaaaagtttgAAGAGAAgtgtgaaaaagaagaaagaaataaaggtgttttagttgaaaatgaaaatgaaaaaaatgagtgTGAGGGGGAAGCTAATGGGGAGAAAGAAGTCAATACTCGGAAGTTGAAAGACAAGAAGAATATGCAAAAGAATCCAACTACTCAGCACTTGCCTTACCCTCAAgttccaacaaagaaagataaagAAAGGCAATATGCAAGGATTTTGGATATCTTTAAAAGGTTGTAG 2019 0.3804 MNSSLFSFLKAKGVYGAYLVACHDKENEEFQSIVKLATGFTEKELDERSAILRSKIVVLEFYSGVVIVAREALLSGVQSLSISLDWKKDESKQTDFKDAVEVCLPLINPKNCFLNIEIARSPSSNKVSADNLLFDPEIERTARRNNSKTRRKKQLAKQRKQQEGSSISISSTSSGAEEIMANIPEPQPDGNGGAMPCHNSPRRLAHLARPQRGARQPEMKTGLLQLLRRSSIHENVSTFIDWSRKGLVSRPTNTCHDKLECIPHHKFMEAKTSIAVFSQGANETLNEAWERYKSMLRKCPNHGFDELTQIHIFRNGLLQQIKLLLDATAGGSLLSLSAADATAIIEKMALSDRQGDYNRNPVHRKAGILELDTSDAVLAQNKLLTNTVDQLSKQMARMISLQEETGKAKQVAFCELCTGDHATGHCPPAKEEVNFMGNQPRQNQYQNNAGYQRNNNANYGQGWRQDAGSSNRQRQYESFNQPPPTNNQNSSLEETMKKFMEQQHKFQQDVQIYQRGNNAVLRNLETQIGQIARQVASNNNQPGSFAANTEPNPKEQCKSIMTRSGKEIGVGIGDNLRTEKAVVDAREKEEEKFEEKCEKEERNKGVLVENENEKNECEGEANGEKEVNTRKLKDKKNMQKNPTTQHLPYPQVPTKKDKERQYARILDIFKRL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02737 672 PANTHER BNAC01G31420D PROTEIN 61 127 - -
Tsu08g02737 672 MobiDBLite consensus disorder prediction 139 201 - -
Tsu08g02737 672 SUPERFAMILY Nucleic acid-binding proteins 11 57 IPR012340 -
Tsu08g02737 672 Coils Coil 138 158 - -
Tsu08g02737 672 MobiDBLite consensus disorder prediction 440 490 - -
Tsu08g02737 672 Coils Coil 521 541 - -
Tsu08g02737 672 PANTHER 5'-NUCLEOTIDASE SURE 61 127 IPR030048 GO:0008252
Tsu08g02737 672 MobiDBLite consensus disorder prediction 611 658 - -
Tsu08g02737 672 Pfam Survival protein SurE 61 124 IPR002828 GO:0016787
Tsu08g02737 672 MobiDBLite consensus disorder prediction 611 640 - -
Tsu08g02737 672 Coils Coil 583 603 - -
Tsu08g02737 672 MobiDBLite consensus disorder prediction 160 178 - -
Tsu08g02737 672 Gene3D - 7 165 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02737 Tsu-Chr8 41981495 41988610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02737 10 57 Core DNA Replication Machinery Family AT1G08130 58.333 5.91e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02737 - - lang:109335528 339.732