Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02664 ATGGGGGTGGTTTTGCAAATTATTATGCTCCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAGTGGACAGTCATGGAGAAGCAGTGCACCAAGCCCTTCAGATCCAGCTGGGTCTGTCATATCACCATCTCCATCAACATTACATACAGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATCTTTCTTGCAACCTCCAGTTGCATTACCACCTTCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCCAGTCCTAGTCCAAACACCAAATCCTTATCGCCACCGTATAAGACTGTTTCGGCACCATCAACTGCTGAAATGAATTTTCCACCATCAATGCAACCGATTTCACCTCAAAGGAAAACACCTTTTGTTAGGCCTCCTATATCAAAATCAACTGCTTCAGCTCCTGTTGCAATACCTCCTGGAAATTTACCTAAAACTTCACCTATCAGCCAACCAATTAAACATGGAAGTGTGCCTCCTACGGTTGATAAGAAGAATGAAAGTAAGAGTCACAGCCTAGAGCCAGTTTCACCAGGCTTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTGCATCAGCTCCAGTTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGATGTCCCGGAGCCATCAACTGTTGAAAGGAGAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAACACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAACGTTGATAGGAGGAATGAAAGTAAGAGTCATAACGTAGAGCCAGTTTCACCAGGGTCATTCTTGCACACTCCAGTTGCATTGCCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAACTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAAATGTTATCGCCGCCATATAAGGCTGTTCCCGAGCCATCAACTGCTGAAAGGAATTTCCCACCATCTATGCAACCAATTCCACCTCAAAAGAAAATACCTATTGTTAGGCCTCCTATATCCACACGAACTGCTCCAGCTCCTGTAATAACACCTCCTGGAAATTTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTGTGGCTCCTACGGTTGATAAGAGGAATGAAAGTAAGAGCCACAACTTAGAGCCAGTTTCACCAGGTCCAGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTGCCTCCTAATGCTCATAGAAATggtacaaatacaaataaaccTCACCCCTCAGAGCCAATTTCACCAGCCCCTGCATTCAATTTGCCAAAATATTCGCCGGTGAGTCAGCCAACTGAACCTGGAAGTTTTCCTCCTACTGTCCATAAAGGCAATTCCAGCATCAGGCACACACTGGATCCTGTTTCACAAGCCCCGGTTGCAGAACCTCCTacaaattttccaaaaaaatcacCAGTCAGCCAACCAACTCGTCTTGGAAGTTCTCCACCTAATGTTCATAATAGAACCGTACATAAGGGACACATTTCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGTAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCGATGGGAAAAACGGCAGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTACAGTTTATTCCCCTGCTCAAGCTCCTTCTGTACATAAAGCAAGGCCATTAGACCATGCTCCTGAGCCATTGATTTCACCTCCTAAATCTCCTTTCAACAAAGAAGATCATTCTCCTGCATCTTCACCTTCTAGACCATTTTATAAGCATCACCATACAAGGAACACGATAACCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCATCATTTCTTCCAACAATTAGACGAAGACATTATGCTCCACCACCAATGAACACAGGTTCTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCAGGTTTCACCTGCTCCTTCTCCATCATTCAACACTTTCCCTCACTCAACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGACCTTTTTTGAGGAGCCCTAAGAAGCCAATTCAAGCATTGCCACCCCCACCTCCCAATGAAGATTGTATATCATATAGTTGCTCGGAGCCTTTAACAAATTCACCACCCGGAGTGCCCTGCATGTGTATCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCGTTGATTTGGTACCACTCGGGGAAACATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGttgttataaaaaattcttactTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCGTCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCGTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCAGCTTTTCTAGCAATTGTTTTATGCTCTGCTGTTGTTTTAGCCTTATCCAAATTTAGAGATCGTGTACCTGAGTCTCAACCAACATCAACCCCACGGGTTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCGGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCATATGCAGGATCTGCTAAAACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTCCACCCTTCTAGAATACTTGGAGAGGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGAGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTGGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCCGTGGATTTTTCACAACCGCCTGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGACCCAATGTCCCTTTCGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAATCGGGTTCAACAAATTCTAGCCAGGAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACTACCGGATAGTTTCCGAGGCCACTTTGCAGCCGCTAATTACGATTACGGAGTTGATATCGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTTAGAATGGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTCAGTGAACACGGCTAA 4419 0.4338 MGVVLQIIMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHSGQSWRSSAPSPSDPAGSVISPSPSTLHTDPSPSKAPSLLHPNGSFLQPPVALPPSTSAPTPQKIKGIESSISPSPSPNTKSLSPPYKTVSAPSTAEMNFPPSMQPISPQRKTPFVRPPISKSTASAPVAIPPGNLPKTSPISQPIKHGSVPPTVDKKNESKSHSLEPVSPGFLLHPPVALPPPASAPVPQKIKGIESSISPSPSPSTISLSPPYKDVPEPSTVERRIPIVRPPISTPTAPAPVATPPGNVPKTSPISQPIEHGSLPPNVDRRNESKSHNVEPVSPGSFLHTPVALPPPTSAPIPQKIKGTESSISPSPSPSTKMLSPPYKAVPEPSTAERNFPPSMQPIPPQKKIPIVRPPISTRTAPAPVITPPGNLPKTSPISQPIEHGSVAPTVDKRNESKSHNLEPVSPGPVATPSTNEPKISPISHSTNNGSLPPNAHRNGTNTNKPHPSEPISPAPAFNLPKYSPVSQPTEPGSFPPTVHKGNSSIRHTLDPVSQAPVAEPPTNFPKKSPVSQPTRLGSSPPNVHNRTVHKGHISEPVMPPPTSTFPVDPPLAHPVIPAASPHELPAPVISPSLTPSRRFDGKNGREPVSAPLYKTPKSPPATVYSPAQAPSVHKARPLDHAPEPLISPPKSPFNKEDHSPASSPSRPFYKHHHTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTIRRRHYAPPPMNTGSADSPFTFPIQSPVSQVSPAPSPSFNTFPHSTKIPFHPPKESPLRPFLRSPKKPIQALPPPPPNEDCISYSCSEPLTNSPPGVPCMCIWPMRVGLRLSVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALVDLVPLGETFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAVVLALSKFRDRVPESQPTSTPRVFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGPNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKESGSTNSSQEELSSDFITASEQLPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRMGRSKRLWQIIRNLSGGSVSEHG 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 760 791 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 284 304 - -
Tsu08g02664 1472 PANTHER OS01G0750732 PROTEIN 642 1472 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 520 548 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 51 91 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 38 796 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 566 583 - -
Tsu08g02664 1472 ProSitePatterns Protein kinases ATP-binding region signature. 1095 1117 IPR017441 GO:0005524
Tsu08g02664 1472 CDD STKc_IRAK 1095 1363 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 225 239 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 597 614 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 465 505 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 246 262 - -
Tsu08g02664 1472 ProSiteProfiles Protein kinase domain profile. 1089 1365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 356 371 - -
Tsu08g02664 1472 Pfam Protein tyrosine and serine/threonine kinase 1092 1362 IPR001245 GO:0004672|GO:0006468
Tsu08g02664 1472 Gene3D Phosphorylase Kinase; domain 1 1061 1164 - -
Tsu08g02664 1472 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 642 1472 - -
Tsu08g02664 1472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1211 1223 IPR008271 GO:0004672|GO:0006468
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 108 160 - -
Tsu08g02664 1472 MobiDBLite consensus disorder prediction 712 739 - -
Tsu08g02664 1472 Gene3D Transferase(Phosphotransferase) domain 1 1165 1389 - -
Tsu08g02664 1472 SUPERFAMILY Protein kinase-like (PK-like) 1070 1362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02664 Tsu-Chr8 40446587 40458102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02664 594 1472 Receptor kinase-like Gene Family AT5G56890 53.255 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu08g02664 PK_Tyr_Ser-Thr 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02664 - - gmx:100802309 1577.76