Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02626 atggGTGTTGTTCGAATCCTCTCTTCAGATGCAGTCAAGGCATCAAAATCATGTAATCATACAATTGATTTGACTCCATGGGATCTTCAGTTTCTAACTGCTACACCCAACAAAAAGggtcttctttttcatcatcaaaaagtAGCAAACCAAATCCAACGGTTAAGACACTCTTTATCCTCTTCTCTTGCCTCTTTTCAACCGCTTGCCGGTTGTCTTGAAATAACAGAACACGAAGACAATGTTGCTTCGTGTTCCATAAAGTGCAACAATGTAGGTGCACTTTTTATCCATGCAGCAGCAGAAAATACTTATGTTGCTGACATTGATGGACCGACTTATGTTCCTTCGATAGTCGATtcattttttgcttataatggGGTGAGAAACTACGAAGGCACGTCACAACCATTGTTGGCAGTGCAAGTCACGGAGCTAGTGGACGGAATCTTCGTTGGTTGTACATTCAACCATGTGGCTGTTGACGGAAATTCCATGTGGCATTTCATTAATTCATGGGCCGAAATCTCACGCGGTTCTTGTGATCAAATATCTAAACCTCCAATACTTGAGCATTGGTTTCCAAATGGTATTAAACGTCCCATACAATTTCCTTTCACTATGGAGCCACAAAATAATCCCTCTGATACGCTGAGTTTTTCATCATTTGATGAAGAAAAACTCTGTCTATCAGAGAGGTTATTCCAtttcaaaaaagagaaaatcatgAAACTTAAATCGAAAGTCAATGCAGAGAttggtagtagtagtagtagtagtagtaacaATAAAATATCTTCTCTACAAGCGCTTTTAACTCACCTTTGGTGTTCTGTGATCCGTTCCAAAAAAATTGACCCAAAAGAAGAAGTCCATCTTATTTTCATGATAGGAGTTAGACCAAGATTTGTTCCATCCTTGCTAGAAGATTATTTTGGAAATGCAATTATAGGTTGTGGGATTAAAATGAAAGTTGGGGAGTTGTTGAAGGAAGGTGGACAATGTAAAGGTGCTTTAGAGATGAACAAGTTAATTGCTTCACACTCTAATGAGATGTTGAAGAAACACTATGAGTCTTGGTTgaaaaatccaagttttgttagGCTTGCTGATATgacaaataataatttcttgGCCATTGGCCATTCACCTTGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAACCTGTGGCAGTTCATAATGGAAATAAGATAAATGGATTAGTTAATGTGTTTGCTGGAATAGAAGAAGGTAGTATTGATCTTAGAGTGTGTCTTCCTTACAAGAATTTGGAGGCAATGGGAAATGATCCTCAGTTTATGGCTATTGTTTCCAACTAA 1347 0.3482 MGVVRILSSDAVKASKSCNHTIDLTPWDLQFLTATPNKKGLLFHHQKVANQIQRLRHSLSSSLASFQPLAGCLEITEHEDNVASCSIKCNNVGALFIHAAAENTYVADIDGPTYVPSIVDSFFAYNGVRNYEGTSQPLLAVQVTELVDGIFVGCTFNHVAVDGNSMWHFINSWAEISRGSCDQISKPPILEHWFPNGIKRPIQFPFTMEPQNNPSDTLSFSSFDEEKLCLSERLFHFKKEKIMKLKSKVNAEIGSSSSSSSNNKISSLQALLTHLWCSVIRSKKIDPKEEVHLIFMIGVRPRFVPSLLEDYFGNAIIGCGIKMKVGELLKEGGQCKGALEMNKLIASHSNEMLKKHYESWLKNPSFVRLADMTNNNFLAIGHSPWFDVYGNDFGWGKPVAVHNGNKINGLVNVFAGIEEGSIDLRVCLPYKNLEAMGNDPQFMAIVSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02626 448 Gene3D - 3 199 IPR023213 -
Tsu08g02626 448 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 445 - -
Tsu08g02626 448 Pfam Transferase family 4 442 - -
Tsu08g02626 448 Gene3D - 216 438 IPR023213 -
Tsu08g02626 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02626 Tsu-Chr8 39560987 39562333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02626 53 428 Monolignol Biosynthesis Gene Families AT5G48930 25.954 1.22e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02626 - - mtr:MTR_4g022760 533.102