Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02615 ATGGATGCAGAAGAGATTGCACGTTTAACCGATGCAAAATTAATTGATTGCTACTTGAACCGTATTGAAAATCCTGGTAACATATTTAACTCTGAAAATGTTCTGCTAAATTACCTACCACACCTTTTCATACAAATATTTCTCGTCGTAGTTGCAACTCGTGTAATGTTTGGGATCCTCAAACCCTTACATCAACCTCATTTTGTTGCCGAACTTCTTgctggttttgtgataaatatatatgttcCCTTAATGGATAACACACCCTTTGGAAAGGCACTTTCTGCAAAGGGAATCCTTGGATTTGAGACAATAGCACAATTGGGTGTCATCTACTATGTCTTTGTCACTGGCTTAGAGATGAATTTAGACACATTACTAAGAGCAAGAAAAAAAGCATCAACTATTGCAATTGTTGGCACAATTATTCCAATGATATTAGGATttggaatatattttttggttgaaaaatcactcaacaaaaaaaatggtgaTTTCAACAAAATCTCAGCTTATTTATTATGGTCATTAGTAGTTACTATCACAAGTTTTCCAGTTGTGGCTCACATTCTTTCAGATCTCAAGATTCTCTATACAGGACTTGGTAGAGTTGCATTAACATCAGCTACAATTAATGACTTTATCAATTGGgcaatgtttatatttttaataccaTTAATTATAAATGGTAAAAGGGGTATAGTATCAGTAATATTAACCATagtttttagtaatttttgttACTTTGTGTTACGTCCACCActtaacaaaatattagaagaaaaaacagaagaaaatgaGTGGGATTTGTACCAATTATCATATGTGTTAGTTGGTGTTATTGCATGTGCAACTGTGACTGAATTTCTTGGTACACATTCAGTTGTTGGAGCATTGATTTTTGGATTAATTCTTCCACGTGGAAAGTTTACAGAAATGTTGATTGAACAATCAGAGGATATTGGATCAGGTTATTTGGCACCATTGTTTTTTGCAAGTATTGGTATGAGAAGTAGAGTGGTTCCAATTTtacatgaaaatatatttttggctatatatattatgatcttgttaatttgtgttaAGATTGTGAGTGCTATAGTTGCTACAAGGTTTTATGGAATGCCTATTAGAGATGGTATGGCTCTTGGAGTGATTATGAATACTAAAGGAATCTTATCATTGATTATACTAAACATTGGATGGAATAGAAAGgttGTGAGTCAAGAGGCATTTACAATTATGGTGTTCAGTATATTTTTTATGACAGTTGTAGTGGCTCCAATCATCAATGCAATGTACAAACCAAGAGTGACATATGAGCAAAACAAGTTAAGGACAATAGAGAATTTGAAAGCTGATTCTGAGAAACAAGCGTCGTTGGTTTTACTTCCTTTTCACAAACAGAATACTGCGGAAGGTGCTCTTGAGGTAACCGATCCCGGGTTCAGAGACATAAACCAAAATGTGATGCAAGATGCACCTTGTTCGGTTGGAATATTTGTTGACCGAGGTCATCACACATCGTTGTTCAAGACCAAAATGCGTATTCTTATGATTTTCATTGGTGGACCGGATGACAGGGAAGCCTTAGCAATTGCTTGGAGAATGTCGAAGCATCCGTGGACAAGGCTTACCATGGTGAGGATTCTTTTGTGTGGTAAGGCCGCCAATGTTGAATCAAATGGGTATAGGGAAGGAGAAGGACTATTATCTAATGTTTTAGATACCGAAAAGGAAAAAGAGTTGGATGAAGAGTAT 1761 0.3248 MDAEEIARLTDAKLIDCYLNRIENPGNIFNSENVLLNYLPHLFIQIFLVVVATRVMFGILKPLHQPHFVAELLAGFVINIYVPLMDNTPFGKALSAKGILGFETIAQLGVIYYVFVTGLEMNLDTLLRARKKASTIAIVGTIIPMILGFGIYFLVEKSLNKKNGDFNKISAYLLWSLVVTITSFPVVAHILSDLKILYTGLGRVALTSATINDFINWAMFIFLIPLIINGKRGIVSVILTIVFSNFCYFVLRPPLNKILEEKTEENEWDLYQLSYVLVGVIACATVTEFLGTHSVVGALIFGLILPRGKFTEMLIEQSEDIGSGYLAPLFFASIGMRSRVVPILHENIFLAIYIMILLICVKIVSAIVATRFYGMPIRDGMALGVIMNTKGILSLIILNIGWNRKVVSQEAFTIMVFSIFFMTVVVAPIINAMYKPRVTYEQNKLRTIENLKADSEKQASLVLLPFHKQNTAEGALEVTDPGFRDINQNVMQDAPCSVGIFVDRGHHTSLFKTKMRILMIFIGGPDDREALAIAWRMSKHPWTRLTMVRILLCGKAANVESNGYREGEGLLSNVLDTEKEKELDEEY 587
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02615 587 PANTHER CATION/H+ EXCHANGER 3 456 587 - -
Tsu08g02615 587 PANTHER CATION/H+ EXCHANGER 3 24 456 - -
Tsu08g02615 587 PANTHER CATION/H + ANTIPORTER 456 587 - -
Tsu08g02615 587 Gene3D - 40 442 IPR038770 -
Tsu08g02615 587 Pfam Sodium/hydrogen exchanger family 48 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu08g02615 587 PANTHER CATION/H + ANTIPORTER 24 456 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu08g02615 Tsu-Chr8 39395063 39398600 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02615 456 587 Antiporter Super Family AT2G13620 39.706 3.16e-30 124
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02615 - - mtr:MTR_2g040100 632.869