Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02590 aTGGAGGAAATAAGTTCGACGGTCGCAGTGCCATTAACACTTGGGAATTTAATACAAAAGGAGTCAGTAATGACAAATCTTATGGCAAATACAGCAACAGTTTTAATATTAAATCCTGCTTCAATTGAGGGTTGTCAATCCTTTTCTGTAGGAAGTGGCGACAACGACGACGCAGATATTAATCCACAACGTAAAATATCAGTGTCTCTAGAGGTTAAGGAGAATCATCAAGTTGCAGCAGAAACTGTCGCAGAAATGGTTCTTGAAAGTGacagtaatggaagaaatgatgATGAATTCATGATAGCTAATGATTTTCCGCGTATACATAATCCATCCTCTCAATCTGATGTTAGTAACAAAATCGGTTCTTTTAAGGAGGACTCTGCAATTTCAAGGACTAATTTGTCAGAAATGAATGCACCGAATACCGTCATGGTTGATGGTAATAACCATGATCAGTCAGTTTTGTATAACTCCGTGAAGAACACGGCTTCTGTTGCTATGAAACATGAGAGTGAAGATGGAAGTAAATCAGATGGTTCTGATACAAAACCAATTGATGTAGTTCATGAGATTCCAGAGAAGCGAACATGCACAACAAACTGTGATAATGCTTTGGAATTGAGTGATACTCCTCTTTGTGGTTTCTCATCGGTTTGTGGAAGGAGACAAGAAATGGAAGATGCTATTGTTGTTAAGCCTCAACTTTTTCAAGTACCTTCAATGATGCTAATAGATGGCCATGTGAATGAAAACACAAAACACTCACTAGCACACTTTTTTGGTGTCTTTGATGGACACGGGGGAAGTCAGGTTGCCAATTACTGCCAGACACATCTTCATTCAGTTTTGGTTGAGGAGATAGAAGCCGCAGAATCAAGTATACCCGAAACTaatgaaaaggaaaattggCAGGACCAATGGAAGAAAGTACTCACCAATTGCTTTCAAAAAGTAGATGATAAGATTGTAGGAGGTAATGCAGCTAATGATGGAAGTAACAGTAATGACGGATCTGAGTCAAGTACTGAAGAAACTCTTGCTCCTGAGTGTGCTGGATCCACTGCACTGGTTGCAGTTTTGACTCAAACCCATATAATAGTTGCGAATTGCGGCGATTCAAGAGCAGTCTTGTGTCGAGGAAAAGAAGCACTTCCATTGTCTACTGACCATAGACCAGATAGAGAGGATGAGCGGGAAAGGATAGAAGCTGCCGGAGGAAAGATCATACAATGGAATGGATGCCGTGTTCTTGGTGTTTTGGCAGTGTCAAGGTCAATAGGTGATAGATACTTGAAACCATGGATAATTCCAGATCCAGAAGTCAACTGCGTCCTTCGAGAGAAAACAGACGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTCATAAAAAACGAAGAAGCCTGTGAAATTGCTAGAAAGCGAATCCTTATTTGGCATAAGAAGAATGGAAACAATGTATCAACAGGACAAGTCGGTGGAGTTGATCCTGCAGCTCAGTATGCTGCAGATTATCTATCAAAACTTGCCCTTCAAAGAGCAAGCAAAGATAATATCTCAGTTATTGTTATAGACTTGAAGGCTCAAAGAGAGTTCAAGAGAAAGGAATAA 1620 0.3932 MEEISSTVAVPLTLGNLIQKESVMTNLMANTATVLILNPASIEGCQSFSVGSGDNDDADINPQRKISVSLEVKENHQVAAETVAEMVLESDSNGRNDDEFMIANDFPRIHNPSSQSDVSNKIGSFKEDSAISRTNLSEMNAPNTVMVDGNNHDQSVLYNSVKNTASVAMKHESEDGSKSDGSDTKPIDVVHEIPEKRTCTTNCDNALELSDTPLCGFSSVCGRRQEMEDAIVVKPQLFQVPSMMLIDGHVNENTKHSLAHFFGVFDGHGGSQVANYCQTHLHSVLVEEIEAAESSIPETNEKENWQDQWKKVLTNCFQKVDDKIVGGNAANDGSNSNDGSESSTEETLAPECAGSTALVAVLTQTHIIVANCGDSRAVLCRGKEALPLSTDHRPDREDERERIEAAGGKIIQWNGCRVLGVLAVSRSIGDRYLKPWIIPDPEVNCVLREKTDECLILASDGLWDVIKNEEACEIARKRILIWHKKNGNNVSTGQVGGVDPAAQYAADYLSKLALQRASKDNISVIVIDLKAQREFKRKE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02590 539 SMART PP2C_4 204 527 IPR001932 -
Tsu08g02590 539 SUPERFAMILY PP2C-like 214 530 IPR036457 -
Tsu08g02590 539 MobiDBLite consensus disorder prediction 327 348 - -
Tsu08g02590 539 Pfam Protein phosphatase 2C 216 522 IPR001932 -
Tsu08g02590 539 Gene3D - 203 539 IPR036457 -
Tsu08g02590 539 CDD PP2Cc 215 529 IPR001932 -
Tsu08g02590 539 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 110 539 - -
Tsu08g02590 539 PANTHER ALPHABET, ISOFORM E-RELATED 110 539 - -
Tsu08g02590 539 MobiDBLite consensus disorder prediction 329 348 - -
Tsu08g02590 539 ProSiteProfiles PPM-type phosphatase domain profile. 214 529 IPR001932 -
Tsu08g02590 539 ProSitePatterns PPM-type phosphatase domain signature. 261 269 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02590 Tsu-Chr8 38886722 38890225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02590 179 538 PP2C-type Phosphatase Gene Family AT4G26080 54.098 2.84e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02590 K14497 - gmx:100812974 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04505 04 52764111 52767186 Tsu08g02590 08 38886722 38890225 PCT