Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02589 ATGAATAGAGGGAGTTTAGAACCTAATCTCAAACTCACTCTTCCTTCATCTAATCAAGCTTCTTTTGCAAAGTTCTTGACACAAAGTGGTACTTTTAAAGAAGGGAATTTGCTTGTTAATAAAGATGGAGTTAGAATTGTCTCTCAAAGTGAAGATGAACCTCAACCACCAATCAAGCCAGTTAACAATCAGATAAGTTTGGCAGAGATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTTCAATTGGTGCAACACAAATGGActaatcaattttttgcattaaAGCAAATTCAAATGAAATTTGAGGAATCGACATGCCAGCGAATAGTACGAGAgctaaaaatcaatcaatcatcacaaTGTCCTCATGTTGTTGTTTGCTACCAAACAATCTATTATAATGGCACCATATCAATCATCTTAGAGTATATGGATGGAGGGTCCTTAGAGGATCTTCTTAACAAAGTTAAAACAATTCCAGAACCATTTCTTGCTGCCATTTGTAAGCAGGTGAGGAATAAGAGACATCGTACTTACTTTTCTGCATGTACCGACACTTCTAATTGA 579 0.3385 MNRGSLEPNLKLTLPSSNQASFAKFLTQSGTFKEGNLLVNKDGVRIVSQSEDEPQPPIKPVNNQISLAEIDTIKVIGKGNGGIVQLVQHKWTNQFFALKQIQMKFEESTCQRIVRELKINQSSQCPHVVVCYQTIYYNGTISIILEYMDGGSLEDLLNKVKTIPEPFLAAICKQVRNKRHRTYFSACTDTSN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02589 192 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Tsu08g02589 192 ProSiteProfiles Protein kinase domain profile. 70 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02589 192 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Tsu08g02589 192 SUPERFAMILY Protein kinase-like (PK-like) 63 175 IPR011009 -
Tsu08g02589 192 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 176 - -
Tsu08g02589 192 Pfam Protein kinase domain 72 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02589 192 SMART serkin_6 70 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02589 192 PANTHER MAP KINASE KINASE 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02589 Tsu-Chr8 38881818 38884024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02589 1 175 MAP Kinase Kinase Gene Family AT4G29810 57.609 3.32e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Tsu08g02589 Pkinase 1.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02589 K20603 - jre:109009962 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04504 04 52758880 52763844 Tsu08g02589 08 38881818 38884024 PCT