LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g02507	ATGGGGAAACATCATTTGACacatttggtgttgtttttgttgttttgtttgaggTTTTTTGTGCCTTGTTTGTGTCAAAAAGATGGTTTGGATAATGTTACTACTTCTGTTTATGTTGTTACTTTGAATCAAGCTCCTACTTCTCATTACTATGGCGGTGATTTGACAAGTTTGAATGATGAAAATAATGGCTTCAAAGATAATGGAAGAACTCAATTTCAGAAACCAAGGTATGGCAATATTACAAAGACAGATAAGAGATTTAGCTCTTATGTTACCCGAGTTCATGAttctttgttgaagaaagtGTTGAAAGGAGAGAAATATTTGAAGCTCTATAGCTACCATTACCTTATTAATGGATTTGCTGTGCTTGTTACCCAACAGCAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGGCCAATGTGGTTTTGGATTTTTCTGTTAGAACTGCAACAACACATACTCCACAGTTTTTAGGTCTTCCACAAGGAGCATGGTCTCAAAATGGTGGGTTTGAAACTGCTGGAGAAGGAATTGTTATCGGTTTTGTTGACACTGGCATAGATCCAACACACCCTAGTTTTGGCGATAGTAAATCTGATCATCTGTATCCTGTTCCTGCTCATTTTTCTGGTATCTGTGAGGTTACTCGTGATTTTCCATCTGGCTCTTGCAATCGGAAACTTGTTGGAGCACGTCATTTTGCAGCATCTGCTATAACCAGGGGAATATTTAATATGACTCAAGACTATGCTTCTCCCTTTGATGGCGATGGCCATGGCACGCATACCGCATCTGTAGCAGCAGGAAACCATGGGATTCCAGTGATTGTTGCTGGACATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTGTACAAGGCACTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCCGCAATTGATCAGGCAGCTCAGGATGGTGTCGACATAATAAGTTTATCGATCACTCCAAATAGGCGCCCTCCTGGTGTTGCAACTTTCTTCAATCCTATAGACATGGCGTTGCTGTCAGCTGTTAAGGCTGGTATTTTTGTAGTGCAAGCTGCTGGGAATACCGGACCGTCACCGATGAGCATGTCTTCCTTCAGTCCATGGATTCTTACTGTTGGTGCTGCCTCTCATGACCGGCTTTACAGTAACTCAATATCTCTCGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTAGcacaaatgaaaacaaactttaCAAACTAATTCATGCACACGATGCTTTGAACAATGACACATCGGTCTCTGATGACATGTATGTTGGTGAGTGCCAAGATGCAAGCAAATACAATCGCGATTTGATCAAAGGGAATCTTCTGATCTGCAGCTACTCAATTCGATTTGTGCTTGGTATTTCCACTATCAAACGAGCGACGGAAACAGCCAAGAACGCGAGTGCAGCCGGTGTTGTCTTCTATATGGATCCTTATGTGATTGGTTTTCAGCTTAACCCGGTTGCCATAAAAATGCCTGGCATAATAATTCCATCCACAAATGACTCAAAGATTTTAATGCAATACTACAATTCTTCGTTGGAAATAGATGCGGTTTCGAAGAAAGTTGTTAAATTTGGGGCTGTTGCTGCAATCTGTGGTGGACTAAAAGCAAATTACAGTAACACTGCACCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGCGGATAGTCTACCTCGCCAAGCAGACATTTTAAAACCCAATTTGTTAGCTCCTGGAAATTTTATATGGGCAGCATGGAGTTCTCTTGGCACCGATTCAGTTGAATTTCAAGGGGAGAATTTTGCAATGATGTCTGGGACAAGTATGGCTGCACCACATATTGCAGGTCTTGCTGCATTAATTAAGCAAAAGTTCCCGAATTTTAGTCCTGCAGCCATTGCTTCGGCACTTTCGACTACTGCTTCTCAGAATGACAAGAGTGGTGGACCAATAATGGCTCAGCGATCATACGCTTTTCCAGATCTAAGCCAAACTCCGTCTACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAACTGGAGCATGA	2100	0.4119	MGKHHLTHLVLFLLFCLRFFVPCLCQKDGLDNVTTSVYVVTLNQAPTSHYYGGDLTSLNDENNGFKDNGRTQFQKPRYGNITKTDKRFSSYVTRVHDSLLKKVLKGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRSSEVANVVLDFSVRTATTHTPQFLGLPQGAWSQNGGFETAGEGIVIGFVDTGIDPTHPSFGDSKSDHLYPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNMTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWILTVGAASHDRLYSNSISLGNNVTIPGVGLAPSTNENKLYKLIHAHDALNNDTSVSDDMYVGECQDASKYNRDLIKGNLLICSYSIRFVLGISTIKRATETAKNASAAGVVFYMDPYVIGFQLNPVAIKMPGIIIPSTNDSKILMQYYNSSLEIDAVSKKVVKFGAVAAICGGLKANYSNTAPKVMYYSARGPDPADSLPRQADILKPNLLAPGNFIWAAWSSLGTDSVEFQGENFAMMSGTSMAAPHIAGLAALIKQKFPNFSPAAIASALSTTASQNDKSGGPIMAQRSYAFPDLSQTPSTPFDMGSGFVNATGA	699

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu08g02507	699	Gene3D	Peptidase S8/S53 domain	179	698	IPR036852	GO:0004252\|GO:0006508
	Tsu08g02507	699	ProSitePatterns	Serine proteases, subtilase family, serine active site.	623	633	IPR023828	-
	Tsu08g02507	699	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	26	150	IPR037045	-
	Tsu08g02507	699	ProSiteProfiles	Serine proteases, subtilase domain profile.	157	699	-	-
	Tsu08g02507	699	Pfam	Peptidase inhibitor I9	37	152	IPR010259	-
	Tsu08g02507	699	Gene3D	-	392	560	-	-
	Tsu08g02507	699	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	23	699	IPR045051	-
	Tsu08g02507	699	Pfam	Subtilase family	177	663	IPR000209	GO:0006508\|GO:0008236
	Tsu08g02507	699	SUPERFAMILY	Subtilisin-like	152	698	IPR036852	GO:0004252\|GO:0006508
	Tsu08g02507	699	CDD	PA_subtilisin_like	398	533	-	-
	Tsu08g02507	699	CDD	Peptidases_S8_3	152	659	IPR034197	-
	Tsu08g02507	699	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	182	193	IPR023827	-
	Tsu08g02507	699	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	23	699	-	-
	Tsu08g02507	699	PRINTS	Subtilisin serine protease family (S8) signature	622	638	IPR015500	-
	Tsu08g02507	699	PRINTS	Subtilisin serine protease family (S8) signature	177	196	IPR015500	-
	Tsu08g02507	699	PRINTS	Subtilisin serine protease family (S8) signature	257	270	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g02507	Tsu-Chr8	37338778	37344067	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu08g02507	1	699	Subtilisin-like Serine Gene Family	AT4G20430	68.785	0.0	993

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g02507	-		-	gmx:100820468	1168.68