Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02498 ATGGCGTCTGATCTAAATTCAGGGTTGTCAAAGAAAACATTTgtttttggattgaaagtttggGTATTAATGGGAATTATTGTTGGTTTATTCATTATAATCATTCTTGCGGTGCTATCGATATGTCTTACTTTAAGAAAGAAATCGAGAAGAGGCAACGGTGGCATGCATCCTCTTAGACATATTCTCTCTATTTCAGAAGAGATCAAAGAAATTAGCGTCGATCAAGTTTCATCGAATAATCATCTGCAAAATGGTTCTTTCATGAGCTTGAATGACAAGTTTAGTGATGGCGATTCCGGAAAGGTTTTGATCCAAACAAAGAATGGAGATAATAGTAGTCAATCAGGCTCGTTCAATCGTTTGGATAAAGATCCGAATGGCTCTCAGTCAGGTGAAGATAGTGGTGGTTTTAGGAGCATTTCGGCTTATAGGTCTTCGTCGCATCCTATATCTGCGCCATCGCCTTGTTCTGGTCTTCCTGAATTCTCTCACCTTGGCTGGGGCCACTGGTTTACACTAAGGGACTTGGAACTTGCAACAAATAGGTTTTCGAAGGAGAATATTATCGGTGAAGGTGGTTATGGAGTTGTCTATCGAGGTCAACTTATCAACGGGAATCCTGTTGCCGTTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAGAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTAGGCTTTTGCATTGAAGGAACTCATAGGTTATTGATTTATGAGTATGTTAACAACGGCAATTTAGAGCAGTGGCTTCATGGAGCCATGCGGCAGCATGGATATCTTACTTGGGAAGCTCGGATAAAAATTCTTCTTGGAACAGCCAAAGCGCTTGCTTACTTGCACGAGGCGATTGAGCCAAAAGTTGTACATCGAGATATTAAATCGAGcaatattttaattgatgataGCTTTAATGCAAAAATATCTGACTTTGGGCTTGCTAAGTTACTTGGTGCCGGAAAAAGTCACATTACAACTAGAGTAATGGGTACTTTTGGATACGTAGCTCCAGAATATGCGAATTCTGGCTTGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTATTACTTCTTGAAGCAATTACAGGAAGAGATCCAGTCGATTATAGCCGATCAGCAGCGGAGGTAAATTTGGTTGACTGGCTGAAGATGATGGTAGGGTGTAGGCGCTCAGAAGAGGTGGTGGACCCTAATATTGAGACTAGGCCATCGACTAGTGCACTAAAACGATCCCTTTTAACTGCTTTGAGATGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCTCGAGAGGATCGAAGACGGAGAAAGAGCCAAGCAGGAAACATAGAGGTAGAGAGCCAGAGGGAGACTTCGGATACAGATAAGAGTGACAATCCAGATCATAAACCAAATGACAGAACGAACCAACACATGTAG 1521 0.4063 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILAVLSICLTLRKKSRRGNGGMHPLRHILSISEEIKEISVDQVSSNNHLQNGSFMSLNDKFSDGDSGKVLIQTKNGDNSSQSGSFNRLDKDPNGSQSGEDSGGFRSISAYRSSSHPISAPSPCSGLPEFSHLGWGHWFTLRDLELATNRFSKENIIGEGGYGVVYRGQLINGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDSFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGCRRSEEVVDPNIETRPSTSALKRSLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGNIEVESQRETSDTDKSDNPDHKPNDRTNQHM 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02498 506 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02498 506 MobiDBLite consensus disorder prediction 106 145 - -
Tsu08g02498 506 PANTHER RECEPTOR-LIKE KINASE PLANT 2 506 - -
Tsu08g02498 506 ProSiteProfiles Protein kinase domain profile. 184 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02498 506 PANTHER OS01G0323000 PROTEIN 2 506 - -
Tsu08g02498 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Tsu08g02498 506 MobiDBLite consensus disorder prediction 440 506 - -
Tsu08g02498 506 SUPERFAMILY Protein kinase-like (PK-like) 168 464 IPR011009 -
Tsu08g02498 506 CDD STKc_IRAK 190 456 - -
Tsu08g02498 506 Pfam Protein kinase domain 185 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02498 506 Gene3D Transferase(Phosphotransferase) domain 1 260 472 - -
Tsu08g02498 506 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Tsu08g02498 506 Gene3D Phosphorylase Kinase; domain 1 166 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02498 Tsu-Chr8 37198855 37203422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02498 17 458 Trihelix Transcription Factor Family AT1G70460 41.518 9.19e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu08g02498 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02498 - - gmx:732653 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04383 04 51721647 51726389 Tsu08g02498 08 37198855 37203422 PCT