Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02480 ATGGTGATTATAAATCAAGGAAGGAAGAAAGAACAGAAAGGAATGCGATTAGGGAAATACGAATTGGGTAAAACACTTGGTGAAGGAAATTTTGGAAAAGTTAAGTTAGCAAAAAACACTGATTCTGAACAATTTTTTGCTGTTAAGATTCTTGAAaagaataagattgttgatCTCAATAACACTGATCAGATAAAGAGAGAGATATCTACTTTGAAGCTTTTGAAGCATCCTAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGCATGGAGGAgaattatttgacaaaattTCATCCAAAGGTAAACTTACAGAAGCTCATGGTAGGAAGATGTTCCAACAATTGATTGATGGTGTGAGCTACTGCCACAATAAAGGTGTCTTCCATAGGGATCTTAAGCTTGAGAATGTACTTTTGGATGCCAAAGGGAACATAAAGATAACTGATTTTAACCTTAGTGCTTTGCCCCAACATTGCAGGGCAGATGGGTTACTGCATACAACTTGTGGAAGTCCGAATTATGTTGCTCCTGAGATTCTTGCCAATAGAGGCTATGACGGTGCAAAATCCGATATTTGGTCATGTGGTGTTATCTTATATGTAATTCTAACAGGATACCTTCCTTTTGATGATAGAAATCTCGCAGTTCTCTATCAAAAGATTTTCAAAGGAGAAGTTCAGATACCAAGATGGTTGTCACCTGGTGCTcaaaacataataaagagaatTCTTGATCCCAATCCTCAAACCAGAATAACAATGTCTATGATCAAAGAAGATGAATGGTTTAAGCAGGGTTATTATCCTGCAAATCTAGATGATGAGGAAGAGGATGTTTACATTGATGATGAAGCCTTTTCCATCCAAGAAGTGTGCCTTGAAGCAGACCAGGGTAGTCCAAAATCACCAACACTAATCAATGCGTTTCAGTTGATAGGGATGTCTTCATGTTTAGATCTCTCCGGCTTTTTTGAGAAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACTTCAAACTATTCACGGAAAGATTTGACGGAGAAGATTGAGGACATTGTAATAGAAATGGGATTTAGAGTTcagaagaaaaatggaaaaTTGAAAGTTATACTCGAGAATAAAGCTCATAAAAGTCTCGGAAGCTTCTCAGTGGTAGCAGAGGTTATTGAAATAGGTCCATCTTTATATGTAGTAGAACTAAGGAAGTCCTATGGAGATCCTTCTGTATATCAACAACTATGCAAGAAGTTATCAAATGACTTGGGTATCGCGAAGGCGGCACAGCTAGTGAGCTCAGAAGTGATAAGCATGTGA 1350 0.3615 MVIINQGRKKEQKGMRLGKYELGKTLGEGNFGKVKLAKNTDSEQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVHGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLLDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGEVQIPRWLSPGAQNIIKRILDPNPQTRITMSMIKEDEWFKQGYYPANLDDEEEDVYIDDEAFSIQEVCLEADQGSPKSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNYSRKDLTEKIEDIVIEMGFRVQKKNGKLKVILENKAHKSLGSFSVVAEVIEIGPSLYVVELRKSYGDPSVYQQLCKKLSNDLGIAKAAQLVSSEVISM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02480 449 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02480 449 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g02480 449 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Tsu08g02480 449 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Tsu08g02480 449 PANTHER - 10 442 - -
Tsu08g02480 449 SUPERFAMILY Protein kinase-like (PK-like) 17 300 IPR011009 -
Tsu08g02480 449 Gene3D Kinase associated domain 1, KA1 318 435 - -
Tsu08g02480 449 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Tsu08g02480 449 Pfam NAF domain 315 374 IPR004041 GO:0007165
Tsu08g02480 449 PANTHER CBL-INTERACTING PROTEIN KINASE 21 10 442 - -
Tsu08g02480 449 CDD CIPK_C 319 430 - -
Tsu08g02480 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Tsu08g02480 449 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02480 Tsu-Chr8 36895898 36904168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02480 83 440 CBL-interacting serine-threonine protein kinases AT3G17510 72.145 3.16e-176 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu08g02480 Pkinase 3.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02480 K07198 - gmx:100815660 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04388 04 51760222 51766042 Tsu08g02480 08 36895898 36904168 PCT