Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02447 ATGAAAAGACAAATTCTAACTTATGGTGTTGTGAAGGTTGTTTTGGATTTGGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCTCAGGTAGGTGCTAAGAAGGTTTATGCGGTGGAAGCTGCTAAGATGCCAAAACACGCCGGTGCACTTGGAGCCATGGTTGAAGTTTTGTGGATGATGGATCAAGAGTCAATTTGTAGAGTTTTTCACAAAGTTGGTGAAGCTGACAAACCAAATGAAATCTTGTTAAGTAATGGAGTCATGAAGATGGAGAAGATTTTAAGAACCTTGACTTCAAGCTTCAATTGCATAGAGATAGCAATCGAAGAATTTAAAGCTGGAATTTAA 351 0.3903 MKRQILTYGVVKVVLDLGAGSGILAIWSAQVGAKKVYAVEAAKMPKHAGALGAMVEVLWMMDQESICRVFHKVGEADKPNEILLSNGVMKMEKILRTLTSSFNCIEIAIEEFKAGI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02447 116 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 53 IPR025799 GO:0016274|GO:0018216
Tsu08g02447 116 Pfam Ribosomal protein L11 methyltransferase (PrmA) 13 43 - -
Tsu08g02447 116 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 53 - -
Tsu08g02447 116 CDD AdoMet_MTases 14 44 - -
Tsu08g02447 116 Gene3D Vaccinia Virus protein VP39 4 103 IPR029063 -
Tsu08g02447 116 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 48 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02447 Tsu-Chr8 36417168 36419807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02447 13 82 C2H2 Transcription Factor Family AT3G12270 38.889 1.60e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02447 K11434 - atr:18431737 66.6254