Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02445 ATGGATGGTGTCACTGTCAAGCTTGAGCCAGAACAGTTTACGGTTCTAGAATCTTCTCCTATTGCTGTTGAAAATCATGGTGATTGTGTTGATGGTGTTAGTTCCAATATGGGTGATGGATCAATGATGAATTTCTCAGCTAACAAgtCCATGCCAGCATCTGGAATGAACTCAGTGGTTCCTAATACAAGTCAGCTTACCATCTTCTATAATGGGAGTATTTGTATCTATGATGGAATACCTGCAGAAAAGGTGCAGGAAATAATACTCATGGCTGCTGCTGCTGCCAAGTCTACTGAAACAAAGAAGATTGTGAAACAATCTCCCGTCCCTTCACCTGCGCCAACAAGGCCTTCTTCTCCACATGGAACCACTGATAATATTGCTTCACAGCAGGGACTCTGCTATCCTGCAAAGAAGAGTTCCATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAATGTTTCTTCAGAAGCGGCGAGACAGgTTGGGTAGTAAAGCACCTTATCCTTCCTCCCCAACAACAAAGGTAGCTGATAACATAGAGAACAACTTCTGTTCTGAGAATTCGCCAGATTCAGTTTCAATGAAGGGGCCAAAGGAGGAATTTCAGCCAACTGTATCTACCTCTTGA 648 0.4321 MDGVTVKLEPEQFTVLESSPIAVENHGDCVDGVSSNMGDGSMMNFSANKSMPASGMNSVVPNTSQLTIFYNGSICIYDGIPAEKVQEIILMAAAAAKSTETKKIVKQSPVPSPAPTRPSSPHGTTDNIASQQGLCYPAKKSSICRLQEFPIARRHSLQMFLQKRRDRLGSKAPYPSSPTTKVADNIENNFCSENSPDSVSMKGPKEEFQPTVSTS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02445 215 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 31 193 IPR040390 -
Tsu08g02445 215 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Tsu08g02445 215 SMART tify_2 59 94 IPR010399 -
Tsu08g02445 215 Pfam Jas motif 150 174 IPR018467 -
Tsu08g02445 215 MobiDBLite consensus disorder prediction 101 129 - -
Tsu08g02445 215 Pfam tify domain 61 93 IPR010399 -
Tsu08g02445 215 MobiDBLite consensus disorder prediction 167 215 - -
Tsu08g02445 215 MobiDBLite consensus disorder prediction 173 199 - -
Tsu08g02445 215 PANTHER DIVERGENT CCT MOTIF PROTEIN 31 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02445 Tsu-Chr8 36403894 36408747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02445 58 177 Tify Gene Family AT5G20900 52.066 3.80e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu08g02445 tify 3.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02445 K13464 - gmx:100306045 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04425 04 52041923 52044666 Tsu08g02445 08 36403894 36408747 PCT