Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02439 ATGGCTTCTTCATCTCACAAACTCTTCCTACTTCtttttacaataattttctCACTTACTTTACCTCTCCACACAAATTCTTCCACAACCACAACATTAAATCTCAAACTTTCTTCCTTAAAATCTTTATGCAAAACAACACCATACCCAAAACTTTGTTTCAATTCACTAAAACTATCTATATCAATAAACATTAATCCAAACATCTTAACCTATCTCCTTCAATCACTTCAACTAGCAATATCCGAAACCACGAAGCTCTCTAATCTTTTCCATGACGTAGGAAACACGAACATTATAGAGAAACAACGAGGATCAATTCAAGATTGCAAGGAACTTCACCAATCAACTTTAACTTCATTGCAAAGATCATTATCCGGAATTCGTTCCTcgaacaaaagaaaattatctgATGCTCGAATCTACCTTAGTGCAGCACTTACCAACAAAAACACATGTTTAGAAGGACTTGATTCTACTTCTGGTAATCTTAAACAAGTTCTTGTGGATTCTGTTATTAACACTTACAAACATGTAAGTAATTCACTTTCTATGCTTTCTAATCATGGAACTGAGACTTCAAATCAAAAGGGTCATAGGAAAAACCAGGTTTCTCCAAAATGGTTGTCAAAAAGCTTAGATTTGGATAAATATGATCCAAATGAATTGCTTGTTGTGGCTACAGATGGAACTGGGAATTTTAGCACAATCAGTGATGCTATAAACTTTGCTCCAAATAATAGTATGATTAAGACAGTGATTTATGTAAAAGAAGGGATTTATGATGAAAATGTTGAAATACCAAGTTATAAAACCAACATTGTAATGCTTGGTGATGGAAGTGATTCTACTATCATCACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACATTAGctGTATCTGGTGATGGTTTTCTTGCAAGAGATATAGCATTTGAGAACAGAGCAGGGCCAGAGAAACATCAAGCAGTTGCATTAAGAGTAAATGCAGACTTAACAGCATTTTACAAATGTGCAATTTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTTTATAGAGAATGCGACATTTACGGTACCATAGATTTCATATTTGGTAACGCAGCAGTAGTTTTACAAGAATGTGACATTGTTTCAAGAATGCCATTACCTGGTCAATTCACTGTTATAACTGCACAAGCACGAGATAACCCCGATGAAGATACAGGAATATCAATCCAAAACTGTTCAATTATAGCTACTGATGAACTTTATTCAAACTCTAGTAGCTTCAAGAGTTACCTTGGAAGGCCATGGAGGGTATTTTCAAGAACTGTTTTCATTGAATCTTATATCGATGATTTTATTGATCAAAAGGGTTGGACAAAATGGTCTACTGATCAAGGTTTGGATACTTTGTTTTATGGCGAGTACGAGAATTATGGACCTGGTTCAAAGATTGATAATCGTGTTGAATGGGCCGGTTATCATTTGATGGATTATAATGATGCATATAATTTCACTGTTTCTGAGTTTATTATTGGTGATGAATGGCTTGAGTCTACTTCAGTTCCTTATGATGATGGGATTTGA 1602 0.3421 MASSSHKLFLLLFTIIFSLTLPLHTNSSTTTTLNLKLSSLKSLCKTTPYPKLCFNSLKLSISININPNILTYLLQSLQLAISETTKLSNLFHDVGNTNIIEKQRGSIQDCKELHQSTLTSLQRSLSGIRSSNKRKLSDARIYLSAALTNKNTCLEGLDSTSGNLKQVLVDSVINTYKHVSNSLSMLSNHGTETSNQKGHRKNQVSPKWLSKSLDLDKYDPNELLVVATDGTGNFSTISDAINFAPNNSMIKTVIYVKEGIYDENVEIPSYKTNIVMLGDGSDSTIITGNRSVVDGWTTFRSATLAVSGDGFLARDIAFENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQARDNPDEDTGISIQNCSIIATDELYSNSSSFKSYLGRPWRVFSRTVFIESYIDDFIDQKGWTKWSTDQGLDTLFYGEYENYGPGSKIDNRVEWAGYHLMDYNDAYNFTVSEFIIGDEWLESTSVPYDDGI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02439 533 Gene3D - 220 533 IPR012334 -
Tsu08g02439 533 Pfam Plant invertase/pectin methylesterase inhibitor 39 185 IPR006501 GO:0004857
Tsu08g02439 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 189 IPR006501 GO:0004857
Tsu08g02439 533 PANTHER PECTINESTERASE 7 532 - -
Tsu08g02439 533 Pfam Pectinesterase 224 519 IPR000070 GO:0030599|GO:0042545
Tsu08g02439 533 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Tsu08g02439 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 187 IPR035513 -
Tsu08g02439 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 188 IPR035513 -
Tsu08g02439 533 SMART PMEI_2 35 185 IPR006501 GO:0004857
Tsu08g02439 533 MobiDBLite consensus disorder prediction 186 206 - -
Tsu08g02439 533 PANTHER PECTINESTERASE 7 532 - -
Tsu08g02439 533 SUPERFAMILY Pectin lyase-like 222 530 IPR011050 -
Tsu08g02439 533 ProSitePatterns Pectinesterase signature 1. 248 267 IPR018040 -
Tsu08g02439 533 CDD PMEI-like_3 42 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02439 Tsu-Chr8 36088007 36090714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02439 32 533 Carbohydrate Esterase AT2G26440 64.423 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02439 - - gmx:102665651 791.956